Gene SeD_A3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3236 
Symbolpcm 
ID6871453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3112348 
End bp3112974 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID642786251 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_002216892 
Protein GI198242854 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGTG GACGTGTACA GGCTCTTCTT GAACAATTGC GCGCGCAGGG CATCAGAGAT 
GAGCAGGTGC TTAATGCGCT TGCCGCAGTG CCGCGCGAGA AATTTATTGA TGAAGCGTTT
GAACATAAGG CCTGGGAAAA TATCGCTTTG CCGATAGGCC AGGGTCAGAC GATTTCGCAG
CCCTACATGG TGGCGCGAAT GACGGAACTG CTCGAACTGA CGCCGCAATC CAGGGTGTTG
GAAATTGGCA CCGGTTCCGG CTATCAGACG GCGATTCTGG CGCATCTGGT ACATCACGTT
TGCTCCGTTG AGCGGATTAA GGGGCTGCAA TGGCAGGCGC GCCGCCGCCT GAAGCAGCTC
GATTTACATA ATGTTTCTAC CCGTCATGGC GATGGCTGGC AAGGCTGGCA GGCGCGTGCG
CCGTTTGACG CTATCATTGT GACGGCCGCG CCACCGGAAA TTCCTACCGC GCTCATGGCA
CAGTTGGATG AAGGCGGCAT TCTTGTTCTG CCCGTGGGCG ATGAGCAGCA GTTTTTGAAA
CGCGTGCGTC GCCGGGGCGG CGAATTTATT ATCGATACCG TGGAGGCCGT TCGCTTCGTC
CCGTTAGTCA AGGGAGAGCT GGCCTAG
 
Protein sequence
MVSGRVQALL EQLRAQGIRD EQVLNALAAV PREKFIDEAF EHKAWENIAL PIGQGQTISQ 
PYMVARMTEL LELTPQSRVL EIGTGSGYQT AILAHLVHHV CSVERIKGLQ WQARRRLKQL
DLHNVSTRHG DGWQGWQARA PFDAIIVTAA PPEIPTALMA QLDEGGILVL PVGDEQQFLK
RVRRRGGEFI IDTVEAVRFV PLVKGELA