| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3234 |
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| Symbol | nlpD |
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| ID | 6872507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3111039 |
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| End bp | 3112172 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642786250 |
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| Product | lipoprotein NlpD |
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| Protein accession | YP_002216891 |
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| Protein GI | 198243830 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCGG GAAGCCCAAA ATTCACCGTT AGTCGCATTG CGGCACTATC ACTGGTTTCA
CTATGGCTGG CAGGTTGTAC CAGTTCGTCA AACCCTCCGG CGCCGGTCAC GTCTGTGGAC
AGTGGGTCGT CATCAAATAC CAATTCCGGG ATGTTGATCA CACCGCCGCC AAAAATGGGC
GCGACGACGC AACAAACGCC GCAACAAGCG CCGCAAATTC AACCCGTTCA GCGTCCTGTA
ACGCAGCCCA TGCAAACTCA ACCGGTCACG GAACAACCCG TGCAGATGGA AAATGGGCGA
ATTGTATACA ATCGCCAGTA TGGGAATATT CCGAAAGGTA GCTATACGGG TGGCAGTACT
TACACCGTGA AAAAGGGTGA TACGCTTTTT TACATCGCCT GGATTACCGG GAACGATTTC
CGCGATCTGG CCCAGAGAAA CAGTATTTCT GCCCCGTATA GCCTGAATGT AGGGCAAACT
TTGCAAGTTG GTAACGCATC CGGTATGCCA ATTACTGGCG GAAATGCGAT CACCCAGGCG
GATGCAGCAC AGCAAGGAGT TGTGACCAGG TCTGCACAAA ATTCCACCGT TGCAGTTGCG
TCTCAACCAA CAATTACGTA TTCTGAGGGC TCAGGTGAAC AAAGTGCTAA CAAAATGTTG
CCAAACAACA AGCCTGCTGG GACGGTTGTC ACAGCGCCTG TAACGGCACC AACGGTAAGC
ACGACCGAAC CAAATGCAAG CAGTACGTCA ACCAGCGCGC CGATTTCCGC ATGGCGCTGG
CCGACGGATG GCAAAGTGAT CGAAAACTTT GGCGCTTCCG AAGGGGGCAA TAAAGGGATC
GACATTGCAG GCAGTAAGGG ACAGGCTATC GTCGCAACCG CTGATGGGCG CGTCGTATAT
GCCGGTAACG CACTGCGTGG TTACGGTAAT CTTATTATCA TCAAACATAA CGATGATTAC
CTGAGTGCCT ACGCCCATAA TGATACGATG CTGGTCCGGG AACAACAGGA AGTTAAGGCG
GGGCAAAAAA TCGCTACTAT GGGTAGCACC GGCACCAGCT CTACACGCTT GCATTTTGAA
ATTCGTTACA AGGGGAAATC CGTAAACCCG CTGCGTTATT TACCGCAGCG ATAA
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| Protein sequence | MSAGSPKFTV SRIAALSLVS LWLAGCTSSS NPPAPVTSVD SGSSSNTNSG MLITPPPKMG
ATTQQTPQQA PQIQPVQRPV TQPMQTQPVT EQPVQMENGR IVYNRQYGNI PKGSYTGGST
YTVKKGDTLF YIAWITGNDF RDLAQRNSIS APYSLNVGQT LQVGNASGMP ITGGNAITQA
DAAQQGVVTR SAQNSTVAVA SQPTITYSEG SGEQSANKML PNNKPAGTVV TAPVTAPTVS
TTEPNASSTS TSAPISAWRW PTDGKVIENF GASEGGNKGI DIAGSKGQAI VATADGRVVY
AGNALRGYGN LIIIKHNDDY LSAYAHNDTM LVREQQEVKA GQKIATMGST GTSSTRLHFE
IRYKGKSVNP LRYLPQR
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