Gene SeD_A3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3229 
Symbol 
ID6875359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3107097 
End bp3107501 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content53% 
IMG OID642786245 
Producttranscriptional regulator HosA 
Protein accessionYP_002216886 
Protein GI198242888 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.880017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTAC GAAACACCGC GTTTCATCTG TTACGCCAAC TTTTTCAGCA ACATACCGCA 
CGCTGGCAGC ATGAACTACC GGAGCTCACC AAACCTCAAT ATGCGGTGAT GCGCGTTATT 
GCTGAACATC CGGGTATTGA ACAGGTCGAT CTGACCGAAG CGGCGGTCAG CACTAAAGCG 
ACGCTGGCGG AGATGTTAAG CCGGATGGAA AATCGTGGGC TGGTGAAGCG AGAAAACGAT 
CCGCTGGATA AACGTCGGCG TTTTGTCTAT CTCACCGTTC AGGGCCAAAC GTTGCTCGCC 
GCCGCGATAC CACTGGGGGA TCGCGTTGAC GATGAGTTTT TGGGGCGACT GAGCGCTGAA 
GAACGCGAAC AGTTTACGCA ACTGGTACGC AAGATGATGA CGTAA
 
Protein sequence
MELRNTAFHL LRQLFQQHTA RWQHELPELT KPQYAVMRVI AEHPGIEQVD LTEAAVSTKA 
TLAEMLSRME NRGLVKREND PLDKRRRFVY LTVQGQTLLA AAIPLGDRVD DEFLGRLSAE 
EREQFTQLVR KMMT