Gene SeD_A3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3227 
Symbol 
ID6875518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3105194 
End bp3106117 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content60% 
IMG OID642786243 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_002216884 
Protein GI198242000 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG GAACTGATTT TCATGTCGGC ATTGTGGGGC TTGGCTCAAT GGGAATGGGC 
GCTGCGCGTT CATGCCTGCG CGCCGGGCTT TCCACATGGG GGGCCGATCT TAACCCGCAA
GCGTGCGCGA ATCTGCTCGC TGAAGGGGCT TGTGGGGCTG CCGCCAGCGC CAGGGAGTTC
GCCGGCGTCG TGGATGCGTT AGTCATTCTG GTCGTCAATG CCGCCCAGGT CAGACAGGTG
TTATTCGGTG AGGATGGCGT CGCCCATCTG ATGAAACCCG GAAGCGCGGT GATGGTTTCG
TCTACGATCT CAAGCGCCGA CGCGCAAGAG ATCGCCGCGG CGTTGACGGC ATTGAATCTT
AACATGCTGG ATGCGCCGGT TTCCGGCGGC GCGGTAAAAG CGGCGCAGGG CGAAATGACG
GTGATGGCCT CCGGGAGCGA GGCGGCGTTT ACCCGCCTGA AGCCTGTGCT GGACGCCGTT
GCCAGCAACG TTTATCGCAT CAGCGATACG CCGGGCGCAG GCTCAACCGT CAAAATCATT
CATCAGCTGC TGGCTGGCGT GCATATTGCG GCGGCGGCCG AAGCGATGGC GCTGGCCGCG
CGGGCTGGTA TTCCTCTGGA CGTGATGTAT GACGTCGTGA CCCATGCCGC CGGCAACTCC
TGGATGTTCG AAAACCGTAT GCAGCATGTC GTTGACGGCG ACTATACCCC GCGTTCGGCC
GTCGACATTT TTGTCAAAGA TTTGGGGCTG GTTGCCGACA CGGCGAAAGC GCTGCGCTTC
CCCTTACCGC TGGCCTCTAC GGCGTTAAAT ATGTTCACCA GCGCCAGTAA CGCCGGTTAT
GGCAAAGAGG ATGACAGCGC TGTGATCAAA ATTTTCTCAG GGATTACTCT GCCTGGCGTC
ACGCCTGAGG AGCCGTCATG TTAA
 
Protein sequence
MTTGTDFHVG IVGLGSMGMG AARSCLRAGL STWGADLNPQ ACANLLAEGA CGAAASAREF 
AGVVDALVIL VVNAAQVRQV LFGEDGVAHL MKPGSAVMVS STISSADAQE IAAALTALNL
NMLDAPVSGG AVKAAQGEMT VMASGSEAAF TRLKPVLDAV ASNVYRISDT PGAGSTVKII
HQLLAGVHIA AAAEAMALAA RAGIPLDVMY DVVTHAAGNS WMFENRMQHV VDGDYTPRSA
VDIFVKDLGL VADTAKALRF PLPLASTALN MFTSASNAGY GKEDDSAVIK IFSGITLPGV
TPEEPSC