Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3218 |
Symbol | mutS |
ID | 6872537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3094770 |
End bp | 3097337 |
Gene Length | 2568 bp |
Protein Length | 855 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786235 |
Product | DNA mismatch repair protein MutS |
Protein accession | YP_002216876 |
Protein GI | 198242699 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.864156 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGT CATTTGATAA GGACTTCTCC AACCACACCC CGATGATGCA GCAGTATCTC AAGCTGAAAG CCCAGCATCC GGAGATCCTG CTCTTTTATC GTATGGGAGA CTTTTACGAG CTGTTTTATG ACGACGCAAA GCGTGCGTCG CAGTTGCTCG ATATTTCGCT GACCAAACGC GGCGCATCGG CTGGCGAACC TATCCCTATG GCGGGTATCC CGCACCACGC CGTAGAAAAC TACCTCGCGA AACTGGTCAA TCAGGGCGAA TCCGTCGCTA TTTGCGAACA GATTGGCGAT CCGGCCACCA GCAAAGGTCC CGTTGAACGT AAGGTCGTGC GTATCGTTAC GCCTGGCACT ATCAGCGATG AAGCCCTGTT ACAGGAGCGT CAGGATAACC TACTGGCGGC TATCTGGCAG GATGGTAAAG GTTACGGTTA CGCCACGCTG GATATCAGCT CCGGGCGCTT TCGTCTGAGC GAACCCGCCG ACCGTGAAAC GATGGCCGCA GAGCTGCAGC GCACCAATCC CGCCGAACTG TTGTATGCCG AAGATTTTGC TGAAATGGCG TTAATAGAGG GACGCCGGGG TCTGCGCCGT CGCCCGTTGT GGGAGTTTGA GATTGATACC GCCCGCCAGC AGTTAAATCT GCAGTTCGGT ACGCGGGATC TGGTCGGTTT CGGCGTCGAA AATGCCTCGC GTGGATTATG TGCGGCAGGC TGCCTGTTAC AGTACGTAAA AGATACCCAG CGCACCTCCC TGCCGCATAT TCGTTCCATT ACGATGGAAC GCCAGCAGGA CAGCATCATT ATGGATGCCG CGACCCGCCG CAATCTGGAA ATTACCCAGA ACCTGGCCGG TGGTGTCGAA AATACCCTCG CCGCGGTGCT TGACTGTACC GTGACGCCAA TGGGTAGCCG AATGCTTAAA CGCTGGCTGC ATATGCCGGT ACGAAATACC GACATATTAC GTGAACGCCA GCAGACCATC GGCGCCTTGC AGGACACCGT CAGCGAACTG CAACCGGTGC TGCGTCAGGT CGGCGATTTG GAGCGTATCC TTGCGCGTCT GGCGCTGCGC ACCGCGCGTC CGCGCGATCT CGCCCGAATG CGTCACGCCT TCCAGCAACT GCCGGAATTG CACGCTCAGC TTGAAACCGT TGACAGCGCG CCGGTACAGG CGTTGCGTAA AAAAATGGGC GATTTCGCCG AGCTGCGCGA CCTCCTGGAA CGCGCCATTA TTGACGCGCC GCCGGTACTG GTCCGCGACG GCGGCGTTAT TGCGCCCGGC TACCATGAAG AGCTGGACGA ATGGCGCGCG CTGGCGGACG GCGCCACCGA TTATCTCGAT TGTCTGGAAA TTCGCGAGCG CGAGCGTACC GGGCTGGATA CGCTGAAAGT CGGCTATAAC GCGGTACATG GTTATTACAT TCAGATTAGC CGTGGTCAAA GCCATCTGGC GCCCATCAAT TATGTGCGTC GCCAGACGCT GAAAAATGCC GAACGCTACA TTATTCCTGA GCTTAAAGAG TACGAAGATA AAGTTCTGAC CTCGAAAGGC AAAGCGCTGG CGCTGGAAAA ACAGCTATAT GACGAATTGT TTGATCTGCT GTTGCCGCAT CTGGCCGATT TACAGCAGAG CGCCAACGCG CTGGCGGAGC TGGATGTGCT GGTTAACCTG GCCGAACGCG CCTGGACGCT GAATTACACC TGCCCGACAT TTACCGATAA ACCCGGTATC CGTATTACCG AAGGTCGCCA CCCGGTGGTT GAACAGGTAC TGAATGAGCC GTTTATCGCT AACCCGCTCA ATTTATCGCC GCAGCGCCGG ATGTTGATCA TTACCGGCCC CAATATGGGC GGTAAAAGTA CCTATATGCG ACAAACGGCA TTGATTGCCC TGCTGGCCTA TATCGGCAGT TACGTTCCGG CGCAAAACGT GGAAATCGGC CCCATCGACC GTATTTTTAC CCGCGTCGGC GCAGCGGACG ACCTGGCCTC CGGGCGTTCG ACCTTTATGG TGGAGATGAC CGAAACCGCG AACATTCTGC ATAATGCCAC GGAAAACAGT CTGGTATTGA TGGATGAAAT CGGGCGCGGT ACCTCTACGT ATGACGGGCT GTCGTTGGCC TGGGCCTGCG CGGAGAATCT CGCGAATAAG ATTAAAGCGT TAACGCTGTT CGCTACCCAC TACTTCGAGC TGACCCAATT ACCGGAGAAA ATGGAAGGCG TGGCGAACGT CCACCTGGAT GCGCTGGAAC ACGGCGATAC TATCGCGTTT ATGCACAGCG TGCAGGACGG CGCAGCAAGT AAGAGCTATG GCCTGGCGGT CGCGGCGCTT GCGGGCGTCC CTAAAGAAGT CATCAAACGC GCGCGCCAAA AACTCCGCGA GCTGGAGAGC ATCTCGCCCA ATGCGGCGGC AACGCAGGTG GACGGCACGC AAATGTCGTT GCTTGCCGCC CCGGAGGAGG CATCGCCTGC CGTTGAAGCG CTGGAGAATC TCGATCCGGA CTCCCTGACG CCACGCCAGG CGCTGGAGTG GATCTATCGG CTGAAAAGTC TGGTGTAA
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Protein sequence | MNESFDKDFS NHTPMMQQYL KLKAQHPEIL LFYRMGDFYE LFYDDAKRAS QLLDISLTKR GASAGEPIPM AGIPHHAVEN YLAKLVNQGE SVAICEQIGD PATSKGPVER KVVRIVTPGT ISDEALLQER QDNLLAAIWQ DGKGYGYATL DISSGRFRLS EPADRETMAA ELQRTNPAEL LYAEDFAEMA LIEGRRGLRR RPLWEFEIDT ARQQLNLQFG TRDLVGFGVE NASRGLCAAG CLLQYVKDTQ RTSLPHIRSI TMERQQDSII MDAATRRNLE ITQNLAGGVE NTLAAVLDCT VTPMGSRMLK RWLHMPVRNT DILRERQQTI GALQDTVSEL QPVLRQVGDL ERILARLALR TARPRDLARM RHAFQQLPEL HAQLETVDSA PVQALRKKMG DFAELRDLLE RAIIDAPPVL VRDGGVIAPG YHEELDEWRA LADGATDYLD CLEIRERERT GLDTLKVGYN AVHGYYIQIS RGQSHLAPIN YVRRQTLKNA ERYIIPELKE YEDKVLTSKG KALALEKQLY DELFDLLLPH LADLQQSANA LAELDVLVNL AERAWTLNYT CPTFTDKPGI RITEGRHPVV EQVLNEPFIA NPLNLSPQRR MLIITGPNMG GKSTYMRQTA LIALLAYIGS YVPAQNVEIG PIDRIFTRVG AADDLASGRS TFMVEMTETA NILHNATENS LVLMDEIGRG TSTYDGLSLA WACAENLANK IKALTLFATH YFELTQLPEK MEGVANVHLD ALEHGDTIAF MHSVQDGAAS KSYGLAVAAL AGVPKEVIKR ARQKLRELES ISPNAAATQV DGTQMSLLAA PEEASPAVEA LENLDPDSLT PRQALEWIYR LKSLV
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