Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3206 |
Symbol | |
ID | 6873917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 3082797 |
End bp | 3084854 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642786224 |
Product | invasion protein InvA |
Protein accession | YP_002216865 |
Protein GI | 198244993 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4789] Type III secretory pathway, component EscV |
TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 72 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTTT CTCTACTTAA CAGTGCTCGT TTACGACCTG AATTACTGAT TCTGGTACTA ATGGTGATGA TCATTTCTAT GTTCGTCATT CCATTACCTA CCTATCTGGT TGATTTCCTG ATCGCACTGA ATATCGTACT GGCGATATTG GTGTTTATGG GGTCGTTCTA CATTGACAGA ATCCTCAGTT TTTCAACGTT TCCTGCGGTA CTGTTAATTA CCACGCTCTT TCGTCTGGCA TTATCGATCA GTACCAGCCG TCTTATCTTG ATTGAAGCCG ATGCCGGTGA AATTATCGCC ACGTTCGGGC AATTCGTTAT TGGCGATAGC CTGGCGGTGG GTTTTGTTGT CTTCTCTATT GTCACCGTGG TCCAGTTTAT CGTTATTACC AAAGGTTCAG AACGCGTCGC GGAAGTCGCG GCCCGATTTT CTCTGGATGG TATGCCCGGT AAACAGATGA GTATTGATGC CGATTTGAAG GCCGGTATTA TTGATGCGGA TGCTGCGCGC GAACGGCGAA GCGTACTGGA AAGGGAAAGC CAGCTTTACG GTTCCTTTGA CGGTGCGATG AAGTTTATCA AAGGTGACGC TATTGCCGGC ATCATTATTA TCTTTGTGAA CTTTATTGGC GGTATTTCGG TGGGGATGGC CCGCCATGGT ATGGATTTGT CCTCCGCTCT GTCTACTTAT ACCATGCTGA CCATTGGTGA TGGTCTTGTC GCCCAGATCC CCGCATTGTT GATTGCGATT AGTGCCGGTT TTATCGTGAC TCGCGTAAAT GGCGATAGCG ATAATATGGG GCGGAATATC ATGACGCAGC TGTTGAACAA CCCATTTGTA TTGGTTGTTA CGGCTATTTT GACCATTTCA ATGGGAACTC TGCCGGGATT CCCGCTGCCG GTATTTGTTA TTTTATCGGT GGTTTTAAGC GTACTCTTCT ATTTTAAATT CCGTGAAGCA AAACGTAGCG CCGCCAAACC TAAAACCAGC AAAGGCGAGC AGCCGCTTAG TATTGAGGAA AAAGAAGGGT CGTCGTTGGG ACTGATTGGC GATCTCGATA AAGTCTCTAC AGAGACCGTA CCGTTGATAT TACTTGTGCC GAAGAGCCGG CGTGAAGATC TGGAAAAAGC TCAACTTGCG GAGCGTCTAC GTAGTCAGTT CTTTATTGAT TATGGCGTGC GCCTGCCGGA AGTATTGTTA CGCGATGGCG AGGGCCTGGA CGATAACAGC ATCGTATTGT TGATTAATGA GATCCGTGTT GAACAATTTA CGGTCTATTT TGATTTGATG CGAGTGGTAA ATTATTCCGA TGAAGTCGTG TCCTTTGGTA TTAATCCAAC AATCCATCAG CAAGGTAGCA GTCAGTATTT CTGGGTAACG CATGAAGAGG GGGAGAAACT CCGGGAGCTT GGCTATGTGT TGCGGAACGC GCTTGATGAG CTTTACCACT GTCTGGCGGT GACGCTGGCG CGCAACGTCA ATGAATATTT CGGTATTCAG GAAACAAAAC ATATGCTGGA CCAACTGGAA GCGAAATTTC CTGATTTACT TAAAGAAGTG CTCAGACATG CCACGGTACA ACGTATATCT GAAGTTTTGC AGCGTTTATT AAGCGAACGT GTTTCCGTGC GTAATATGAA ATTAATTATG GAAGCGCTCG CATTGTGGGC GCCAAGAGAA AAAGATGTCA TTAACCTTGT AGAGCATATT CGTGGAGCAA TGGCGCGTTA TATTTGTCAT AAATTCGCCA ATGGCGGCGA ATTACGAGCA GTAATGGTAT CTGCTGAAGT TGAGGATGTT ATTCGCAAAG GGATCCGTCA GACCTCTGGC AGTACCTTCC TCAGCCTTGA CCCGGAAGCC TCCGCTAATT TGATGGATCT CATTACACTT AAGTTGGATG ATTTATTGAT TGCACATAAA GATCTTGTCC TCCTTACGTC TGTCGATGTC CGTCGATTTA TTAAGAAAAT GATTGAAGGT CGTTTTCCGG ATCTGGAGGT TTTATCTTTC GGTGAGATAG CAGATAGCAA GTCAGTGAAT GTTATAAAAA CAATATAA
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Protein sequence | MLLSLLNSAR LRPELLILVL MVMIISMFVI PLPTYLVDFL IALNIVLAIL VFMGSFYIDR ILSFSTFPAV LLITTLFRLA LSISTSRLIL IEADAGEIIA TFGQFVIGDS LAVGFVVFSI VTVVQFIVIT KGSERVAEVA ARFSLDGMPG KQMSIDADLK AGIIDADAAR ERRSVLERES QLYGSFDGAM KFIKGDAIAG IIIIFVNFIG GISVGMARHG MDLSSALSTY TMLTIGDGLV AQIPALLIAI SAGFIVTRVN GDSDNMGRNI MTQLLNNPFV LVVTAILTIS MGTLPGFPLP VFVILSVVLS VLFYFKFREA KRSAAKPKTS KGEQPLSIEE KEGSSLGLIG DLDKVSTETV PLILLVPKSR REDLEKAQLA ERLRSQFFID YGVRLPEVLL RDGEGLDDNS IVLLINEIRV EQFTVYFDLM RVVNYSDEVV SFGINPTIHQ QGSSQYFWVT HEEGEKLREL GYVLRNALDE LYHCLAVTLA RNVNEYFGIQ ETKHMLDQLE AKFPDLLKEV LRHATVQRIS EVLQRLLSER VSVRNMKLIM EALALWAPRE KDVINLVEHI RGAMARYICH KFANGGELRA VMVSAEVEDV IRKGIRQTSG STFLSLDPEA SANLMDLITL KLDDLLIAHK DLVLLTSVDV RRFIKKMIEG RFPDLEVLSF GEIADSKSVN VIKTI
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