Gene SeD_A3204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3204 
Symbol 
ID6874935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3081074 
End bp3082369 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content54% 
IMG OID642786222 
ProductATP synthase SpaL 
Protein accessionYP_002216863 
Protein GI198246034 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CTCGTTTACT GCAATATCTG GCCTACCCAC AAAAAATAAC CGGCCCAATT 
ATTGAGGCGG AATTGCGCGA TGTGGCCATT GGCGAACTGT GTGAAATACG CCGTGGCTGG
CACCAAAAAC AGGTTGTTGC ACGTGCGCAG GTGGTTGGCT TACAGCGGGA ACGCACCGTG
CTGAGCCTTA TCGGCAATGC CCAGGGGCTG AGCCGCGATG TCGTGCTTTA TCCCACTGGA
CGTGCGTTAT CGGCGTGGGT GGGATACTCG GTATTAGGCG CGGTGTTGGA TCCGACAGGG
AAAATCGTTG AGCGTTTTAC CCCTGAAGTG GCGCCGATTA GCGAAGAACG CGTTATTGAT
GTCGCACCGC CGTCTTACGC TTCACGCGTT GGCGTCCGTG AACCGCTGAT TACCGGTGTG
CGCGCGATTG ACGGGTTATT GACCTGTGGC GTAGGCCAGC GAATGGGCAT TTTTGCCTCC
GCAGGATGCG GTAAGACCAT GCTGATGCAT ATGCTGATCG AGCAAACGGA GGCGGATGTC
TTTGTTATCG GTCTTATCGG TGAACGAGGC CGTGAGGTCA CTGAATTCGT GGATATGTTG
CGCGCTTCGC ATAAGAAAGA AAAATGCGTG CTGGTTTTTG CCACTTCCGA TTTCCCCTCG
GTCGATCGCT GCAATGCGGC GCAACTGGCG ACAACCGTAG CGGAATATTT TCGCGACCAG
GGAAAACGGG TCGTGCTTTT TATCGATTCC ATGACCCGTT ATGCGCGTGC TTTGCGAGAC
GTGGCACTGG CGTCGGGAGA GCGTCCGGCC CGTCGAGGTT ATCCCGCCTC CGTATTCGAT
AATTTGCCCC GCTTGCTGGA ACGCCCAGGG GCGACCAGCG AGGGAAGCAT TACTGCCTTT
TATACGGTAC TGCTGGAAAG CGAGGAAGAG GCGGACCCGA TGGCGGATGA AATTCGCTCT
ATCCTTGACG GTCACCTGTA TCTGAGCAGA AAGCTGGCCG GGCAGGGACA TTACCCGGCA
ATCGATGTAC TGAAAAGCGT AAGCCGCGTT TTTGGACAAG TCACGACGCC GACACATGCT
GAACAGGCAT CTGCCGTGCG TAAATTAATG ACGCGTTTGG AAGAGCTCCA GCTTTTCATT
GACTTGGGAG AATATCGTCC TGGCGAAAAT ATCGATAACG ATCGGGCGAT GCAGATGCGG
GATAGCCTGA AAGCCTGGTT ATGCCAGCCG GTAGCGCAGT ATTCATCCTT TGATGACACG
TTGAGCGGTA TGAATGCATT CGCTGACCAG AATTAA
 
Protein sequence
MKTPRLLQYL AYPQKITGPI IEAELRDVAI GELCEIRRGW HQKQVVARAQ VVGLQRERTV 
LSLIGNAQGL SRDVVLYPTG RALSAWVGYS VLGAVLDPTG KIVERFTPEV APISEERVID
VAPPSYASRV GVREPLITGV RAIDGLLTCG VGQRMGIFAS AGCGKTMLMH MLIEQTEADV
FVIGLIGERG REVTEFVDML RASHKKEKCV LVFATSDFPS VDRCNAAQLA TTVAEYFRDQ
GKRVVLFIDS MTRYARALRD VALASGERPA RRGYPASVFD NLPRLLERPG ATSEGSITAF
YTVLLESEEE ADPMADEIRS ILDGHLYLSR KLAGQGHYPA IDVLKSVSRV FGQVTTPTHA
EQASAVRKLM TRLEELQLFI DLGEYRPGEN IDNDRAMQMR DSLKAWLCQP VAQYSSFDDT
LSGMNAFADQ N