Gene SeD_A3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3199 
Symbol 
ID6875496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3077782 
End bp3078042 
Gene Length261 bp 
Protein Length86 aa 
Translation table11 
GC content47% 
IMG OID642786217 
Producthypothetical protein 
Protein accessionYP_002216858 
Protein GI198245541 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4794] Type III secretory pathway, component EscS 
TIGRFAM ID[TIGR01403] type III secretion protein, HrpO family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGATT TAGTGTTTGC AGGTAATAAG GCGCTCTATC TTGTTTTGAT CCTGTCAGGG 
TGGCCGACGA TTGTCGCAAC GATTATCGGC CTCCTGGTAG GGTTATTCCA GACGGTAACG
CAATTACAGG AACAGACGCT GCCTTTTGGC ATTAAATTAC TTGGCGTGTG TTTATGCTTG
TTTTTACTGT CTGGCTGGTA TGGCGAAGTT TTACTCTCTT ACGGGCGTCA GGTGATATTC
CTGGCGTTGG CTAAGGGGTA A
 
Protein sequence
MDDLVFAGNK ALYLVLILSG WPTIVATIIG LLVGLFQTVT QLQEQTLPFG IKLLGVCLCL 
FLLSGWYGEV LLSYGRQVIF LALAKG