Gene SeD_A3188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3188 
Symbol 
ID6871334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3066468 
End bp3068075 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content44% 
IMG OID642786208 
Producteffector protein SptP 
Protein accessionYP_002216849 
Protein GI198242758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAATT TAACGTTGTC TTCGTTTTCA AAAGTTGGTG TGTCGAATGA TGCCCGACTT 
TATATTGCTA AGGAAAATAC TGATAAGGCA TATGTTGCGC CTGAAAAATT TTCGTCAAAA
GTATTAACCT GGCTTGGAAA AATGCCGTTA TTTAAAAACA CTGAAGTGGT GCAAAAACAT
ACGGAAAATA TCAGAGTACA GGACCAAAAG ATTTTACAGA CATTTCTCCA TGCACTAACG
GAAAAATATG GGGAAACAGC GGTTAATGAC GCACTGTTAA TGTCCCGTAT AAATATGAAC
AAACCCCTTA CCCAACGTTT AGCAGTGCAG ATCACGGAGT GTGTAAAAGC TGCTGACGAA
GGGTTTATAA ACCTTATTAA GAGCAAGGAT AATGTTGGTG TCAGGAATGC CGCTTTAGTC
ATAAAAGGCG GCGATACAAA AGTGGCAGAA AAAAATAACG ATGTTGGAGC AGAAAGTAAG
CAACCTTTAC TCGATATCGC GCTAAAGGGA CTTAAAAGAA CATTACCGCA ACTGGAACAA
ATGGATGGAA ATAGCCTGCG AGAAAACTTC CAGGAGATGG CTTCAGGTAA CGGCCCGCTG
CGTTCATTAA TGACGAATTT ACAGAATTTA AATAAAATTC CAGAGGCTAA ACAACTTAAT
GATTATGTTA CAACGTTAAC AAATATTCAG GTCGGTGTAG CCCGGTTCTC ACAATGGGGA
ACCTGTGGAG GAGAGGTTGA GAGGTGGGTT GATAAAGCCT CTACTCATGA ATTAACCCAG
GCTGTAAAAA AAATTCACGT TATTGCTAAA GAACTGAAAA ATGTTACAGC TGAACTTGAG
AAAATAGAAG CCGGCGCGCC AATGCCACAG ACGATGAGCG GACCGACACT GGGCCTGGCA
CGGTTTGCGG TCAGCAGCAT TCCAATTAAT CAGCAAACCC AGGTGAAACT GAGCGATGGA
ATGCCTGTGC CAGTGAATAC GTTAACTTTT GACGGTAAGC CTGTGGCATT AGCCGGTTCG
TACCCAAAAA ATACGCCGGA TGCGCTGGCA GCGCATATGA AAATGCTTCT TGAAAAAGAA
TGCTCATGCC TGGTGGTGTT AACGTCGGAA GATCAGATGC AGGCAAAACA ATTACCACCC
TATTTCAGAG GGAGCTACAC CTTTGGCGAG GTGCATACCA ACAGCCAAAA AGTGAGCTCA
GCCAGTCAGG GAGAAGCGAT AGACCAATAC AATATGCAAC TGTCCTGCGG GGAAAAGCGG
TATACAATCC CGGTATTGCA TGTGAAAAAT TGGCCAGATC ACCAGCCGTT ACCGTCTACG
GATCAGTTAG AATACCTGGC GGATAGGGTG AAAAATAGTA ACCAAAATGG CGCGCCGGGG
CGTAGTTCAT CAGATAAGCA TTTACCGATG ATTCATTGTC TGGGCGGAGT GGGGAGAACC
GGAACGATGG CGGCGGCCCT TGTACTTAAG GATAATCCTC ATAGTAATCT GGAGCAGGTA
CGTGCAGATT TCCGGAATTC ACGGAACAAT AGAATGCTGG AAGACGCCTC ACAGTTTGTA
CAACTAAAAG CAATGCAAGC CCAGTTGCTT ATGACGACGG CACGCTGA
 
Protein sequence
MNNLTLSSFS KVGVSNDARL YIAKENTDKA YVAPEKFSSK VLTWLGKMPL FKNTEVVQKH 
TENIRVQDQK ILQTFLHALT EKYGETAVND ALLMSRINMN KPLTQRLAVQ ITECVKAADE
GFINLIKSKD NVGVRNAALV IKGGDTKVAE KNNDVGAESK QPLLDIALKG LKRTLPQLEQ
MDGNSLRENF QEMASGNGPL RSLMTNLQNL NKIPEAKQLN DYVTTLTNIQ VGVARFSQWG
TCGGEVERWV DKASTHELTQ AVKKIHVIAK ELKNVTAELE KIEAGAPMPQ TMSGPTLGLA
RFAVSSIPIN QQTQVKLSDG MPVPVNTLTF DGKPVALAGS YPKNTPDALA AHMKMLLEKE
CSCLVVLTSE DQMQAKQLPP YFRGSYTFGE VHTNSQKVSS ASQGEAIDQY NMQLSCGEKR
YTIPVLHVKN WPDHQPLPST DQLEYLADRV KNSNQNGAPG RSSSDKHLPM IHCLGGVGRT
GTMAAALVLK DNPHSNLEQV RADFRNSRNN RMLEDASQFV QLKAMQAQLL MTTAR