Gene SeD_A3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3174 
Symbol 
ID6871845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3053344 
End bp3054192 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content51% 
IMG OID642786195 
Productchelated iron transport system membrane protein YfeD 
Protein accessionYP_002216836 
Protein GI198242089 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.559168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTAA CAACGTTACT GGAACCCTTT CAGTTTGATT TTATGGTGAA CGCCCTTATG 
GTTTCGGTCA TTGTGGCGAT TCCCTGCGCC TTACTGTCCG TGTTTTTAGT GTTAAAAGGC
TGGGCGTTAA TGGGCGATGC AATGAGTCAT GCGGTATTCC CCGGGGTCGT GCTGGCATAT
ATTGTGGGGA TCCCCCTGGC GATTGGCGCC TTCATTGCCG GATTATTTTG CGCTATCGCG
ACCGGCTATC TGGACGATAA CAGCCGCATC AAACGTGATA CGGTGATGGG CATCGTCTTT
TCCGGGATGT TTGGCGCAGG TCTGGTGCTC TATGTTTCTA TTCAATCGGA AGTGCATCTG
GATCACATCC TGTTTGGGGA TATGCTGGGC GTATCGCTGG GGGATATCGT ACAAACGTCG
GTTATTGCGC TGGGTATTGC GTTAATCATA GGGCTGAAAT GGAAAGATCT CCTGCTACAC
GCTTTTGACC CGCACCAGGC GAAAGCCAGC GGGCTGAATA CCACGCTACT GCATTATGGC
CTGCTATGTA TGATTGCGCT GACTATCGTC GCCACGCTGA AATCGGTGGG CATTATTCTG
TCGATCTCAC TGCTTATCGC CCCCGGCGCA ATTGCCATTT TGCTGACGCG ACGCTTTGCG
CGCGCGCTGG GATTAGCGGT GAGTCTGTCA GTTATTACCG CTTTTGCGGG CGTCTATCTG
TCTTTTTATC TTGATAGCGC GCCAGCGCCG ACCATAGTGG TATTATTTGC CATCGTATTT
ATTGCGGTAT TTATTTACGC AACATGGCGC GACAGGCGTA ATGAAATCGT ACCAGAGGCG
CAAGGTTAA
 
Protein sequence
MFLTTLLEPF QFDFMVNALM VSVIVAIPCA LLSVFLVLKG WALMGDAMSH AVFPGVVLAY 
IVGIPLAIGA FIAGLFCAIA TGYLDDNSRI KRDTVMGIVF SGMFGAGLVL YVSIQSEVHL
DHILFGDMLG VSLGDIVQTS VIALGIALII GLKWKDLLLH AFDPHQAKAS GLNTTLLHYG
LLCMIALTIV ATLKSVGIIL SISLLIAPGA IAILLTRRFA RALGLAVSLS VITAFAGVYL
SFYLDSAPAP TIVVLFAIVF IAVFIYATWR DRRNEIVPEA QG