Gene SeD_A3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3172 
Symbol 
ID6871082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3051675 
End bp3052496 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID642786193 
Productchelated iron transport system membrane protein YfeB 
Protein accessionYP_002216834 
Protein GI198245900 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.513641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.970851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAT CTGCGATTAC CGTTGATCAA GTCACGGTGA CGTATCGCAA CGGTCATACC 
GCCCTACGGG ACGCCACTTT TCAGGTGCCT GGCGGTTCAA TCGCCGCGCT GGTAGGCGTA
AATGGTTCCG GTAAGTCTAC GTTATTTAAA GCGTTAATGG GCTTTGTGCA TCTTGCGCAG
GGCGATATCA CTATCCTGCA ACAGTCAGTC AACAAGGCAC TGAAAAAAAA CCTCATTGCT
TATGTTCCGC AATCGGAAGA AGTGGACTGG TCATTTCCGG TGCTGGTAGA AGATGTGGTG
ATGATGGGAC GCTACGGCCA TATGGGCTGG CTACGCCGTC CCAGTGCGCA TGATCACGCC
TGTGTTGACG CCGCGCTGGC GCGGGTGGAT ATGCAGGAAT ATCGTCACAG GCAGATTGGC
GAGCTGTCCG GCGGGCAGAA AAAACGTGTG TTTCTTGCCA GGGCCATCGC TCAGGATGGA
CAAGTAATCC TGCTGGATGA ACCTTTTACC GGCGTGGATG TAAAAACCGA AGCGCGAATC
ATCGATCTAC TACGGGAACT GCGCGATGAA GGCCGCACGA TGCTGGTCTC AACGCATAAT
CTCGGCTCCG TCACCGAGTT TTGCGACTAT ACGGTAATGA TTAAAGGAAC CGTACTGGCC
AGCGGCCCTA CCGAAACCAC GTTTACCGCC GCGAATCTGG AACAGGCGTT TAGCGGCGTT
CTACGTCATA TCGCGCTAAG CGGAGGCGAA GAGCACATCA TCACCGATGA CGAGCGCCCC
TTTATTTCCC GGCGCGTGGC CAGCGGAGGA AAATCGTCAT GA
 
Protein sequence
MSQSAITVDQ VTVTYRNGHT ALRDATFQVP GGSIAALVGV NGSGKSTLFK ALMGFVHLAQ 
GDITILQQSV NKALKKNLIA YVPQSEEVDW SFPVLVEDVV MMGRYGHMGW LRRPSAHDHA
CVDAALARVD MQEYRHRQIG ELSGGQKKRV FLARAIAQDG QVILLDEPFT GVDVKTEARI
IDLLRELRDE GRTMLVSTHN LGSVTEFCDY TVMIKGTVLA SGPTETTFTA ANLEQAFSGV
LRHIALSGGE EHIITDDERP FISRRVASGG KSS