| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3168 |
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| Symbol | hypE |
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| ID | 6871347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3046866 |
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| End bp | 3047876 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642786189 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_002216830 |
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| Protein GI | 198242620 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 0.707243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAATA TACAACTCGC CCACGGCAGC GGCGGCCAGG CTATGCAACA GTTGATTAAT
AGCCTGTTTA TGGAGGCCTT TGCCAACCCG TGGCTGGCGG AACAAGAAGA TCAGGCGCGT
CTGGAGCTGG CGCAACTGAC GGCGGAGGGC GACCGTCTGG CGTTTTCTAC CGATAGCTAT
GTGATCGATC CGCTCTTTTT CCCCGGCGGC AATATCGGCA AACTGGCGAT TTGCGGTACG
GCGAACGACG TTGCGGTGAG CGGCGCGATC CCCCGCTATC TCTCCTGCGG CTTTATCCTT
GAAGAAGGGC TGCCGATGGA GACGTTAAAA AGCGTGGTCA ATAGCATGGC GGCGACCGCG
CGGGAAGCGG ATATCGCCAT TGTAACCGGC GACACCAAAG TTGTGCAGCG CGGCGCGGCG
GATAAATTAT TTATCAACAC TGCCGGCATG GGGGCGATTC CCGCCGATAT TCGCTGGGGC
GCGCAAACGC TGAGCGTTGG CGATGTGCTG TTAGTCAGCG GTACGCTTGG CGATCACGGT
GCCACTATCC TCAACCTGCG TGAGCAACTG GGACTGGATG GCGAGCTGGC GAGCGACTGC
GCAGTATTAA CGCCGCTTAT TCAGACGCTG CGTCATATTG ACGGAGTGAA GGCATTGCGT
GACGCCACGC GCGGCGGCGT GAATGCGGTC GCCCATGAGT TTGCAACGTC CTGCGGTTAC
GGTATTGAAT TGTCCGAATC CGCACTGCCG CTCAAACCTG CCGTGCGCGG CGTCTGCGAG
CTGTTGGGGC TGGATGCCCT GAACTTTGCC AACGAAGGAA AACTGGTGAT TGCCGTTGAA
CGGCAGGCCG CAGATCGGGC GTTGGCGGCA TTACGCGCGC ATCCGCTGGG ACGTGATGCA
GCGCTGATTG GCGAAGTCGT GGAACGCAAA GGCGTTCGCT TAGCCGGACT CTATGGCGTG
AAGCGAACCC TTGATTTGCC ACACGCCGAA CCATTACCTC GTATATGCTA G
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| Protein sequence | MNNIQLAHGS GGQAMQQLIN SLFMEAFANP WLAEQEDQAR LELAQLTAEG DRLAFSTDSY
VIDPLFFPGG NIGKLAICGT ANDVAVSGAI PRYLSCGFIL EEGLPMETLK SVVNSMAATA
READIAIVTG DTKVVQRGAA DKLFINTAGM GAIPADIRWG AQTLSVGDVL LVSGTLGDHG
ATILNLREQL GLDGELASDC AVLTPLIQTL RHIDGVKALR DATRGGVNAV AHEFATSCGY
GIELSESALP LKPAVRGVCE LLGLDALNFA NEGKLVIAVE RQAADRALAA LRAHPLGRDA
ALIGEVVERK GVRLAGLYGV KRTLDLPHAE PLPRIC
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