Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3166 |
Symbol | hypC2 |
ID | 6875209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 3045476 |
End bp | 3045748 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786187 |
Product | hydrogenase assembly chaperone |
Protein accession | YP_002216828 |
Protein GI | 198244183 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0298] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00074] hydrogenase assembly chaperone HypC/HupF |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.438087 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCATAG GCGTGCCGGG TCAAATCCGC GCCATTGACG GCAATCAGGC AAAAGTTGAC GTCTGCGGCA TTCAGCGCGA CGTCGATCTC ACATTAGTCG GCAGTTGTGA TGAAAACGGT CAGCCGCGTC TGGGTCAGTG GGTGCTGGTT CATGTCGGAT TCGCCATGAG CGTCATTAAC GAAGCGGAAG CGCGCGACAC GCTCGACGCG CTACAAAATA TGTTTGATGT TGAGCCGGAC GTCGGCGCAC TGCTGTATGG TGAGGAGAGA TAA
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Protein sequence | MCIGVPGQIR AIDGNQAKVD VCGIQRDVDL TLVGSCDENG QPRLGQWVLV HVGFAMSVIN EAEARDTLDA LQNMFDVEPD VGALLYGEER
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