| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3165 |
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| Symbol | hypB |
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| ID | 6872312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3044613 |
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| End bp | 3045485 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642786186 |
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| Product | hydrogenase nickel incorporation protein HypB |
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| Protein accession | YP_002216827 |
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| Protein GI | 198245739 |
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| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
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| TIGRFAM ID | [TIGR00073] hydrogenase accessory protein HypB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.591749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTACGA CTTGCGGTTG CGCTGAAGGC AACCTTTATA TAGAAGGCGA TGAACATAAT
CCGCACTCAG CGTTTCGTAG CGCGCCCTTT GCCCCAGCGG CTCGCCCGGC GCTGAATATT
ACCGGCATTA AAACGCCTGA CTTTGCCCCA AGTCAGACCG CAGAAGGCGA TCTGCATTAC
GGCCACGGCG AAGCCGGAAC CCACGCGCCT GGTATGAGTC AGCGGCGGAT GCTGGAGGTT
GAAATCGACG TGCTGGACAA AAATAATCGT CTGGCTGAGC GCAACCGCGC CCGTTTCGCC
GCCCGCCAGC AACTGGTGCT CAACCTGGTG TCCAGCCCCG GGTCCGGTAA AACCACCCTG
CTGACTGAAA CGCTAATGAA ATTGAAAGAC CGTGTACCGT GCGCGGTGAT TGAAGGCGAC
CAGCAGACAG TGAACGACGC CGCCCGCATC CGCGCTACCG GCACGCCCGC CATTCAGGTC
AACACCGGTA AAGGCTGCCA TCTTGACGCG CAAATGATCG CCGACGCCGC GCCGCGCCTG
CCGCTGGATG ACCACGGTAT TCTGTTTATC GAAAACGTCG GTAATCTCGT CTGCCCGGCC
AGCTTCGATC TGGGCGAAAA GCATAAAGTC GCAGTGCTTT CCGTGACCGA AGGTGAAGAT
AAGCCGCTGA AATATCAGCA TATGTTTGCC GCTGCGTCGC TCATGCTGCT CAATAAAGTC
GATCTGCTGC CCTACCTCAA TTTTGACGTT GAGAAGTGCA TCGCCAGCGC GCGTGAAGTG
AACCCGGAGA TTGAAATTAT CCTGATTTCC GCCACCAGCG GCGAAGGCAT GGATCAGTGG
CTGGCCTGGC TGGAGGCGCA GCGATGTGCA TAG
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| Protein sequence | MCTTCGCAEG NLYIEGDEHN PHSAFRSAPF APAARPALNI TGIKTPDFAP SQTAEGDLHY
GHGEAGTHAP GMSQRRMLEV EIDVLDKNNR LAERNRARFA ARQQLVLNLV SSPGSGKTTL
LTETLMKLKD RVPCAVIEGD QQTVNDAARI RATGTPAIQV NTGKGCHLDA QMIADAAPRL
PLDDHGILFI ENVGNLVCPA SFDLGEKHKV AVLSVTEGED KPLKYQHMFA AASLMLLNKV
DLLPYLNFDV EKCIASAREV NPEIEIILIS ATSGEGMDQW LAWLEAQRCA
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