| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3158 |
|---|
| Symbol | hycF |
|---|
| ID | 6873514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3037732 |
|---|
| End bp | 3038274 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642786179 |
|---|
| Product | formate hydrogenlyase complex iron-sulfur subunit |
|---|
| Protein accession | YP_002216820 |
|---|
| Protein GI | 198243506 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 0.088865 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACCT TTATCAAAAA AGTTATCAAA ACCGGCACGG CGACCTCGTC TTATCCGCTG
GAGCCGATTG CGGTTGATAA AAACTTCCGC GGCAAGCCGG AACATAATCC GCAGCAGTGC
ATCGGCTGCG CCGCCTGCGT TAATGCCTGC CCGTCGAACG CGCTGACGGT GGAAACCGAT
CTTGCGACCA ATGAGCTGGC GTGGCAGTTC AATCTTGGCC GCTGCATTTT CTGCGGTCGC
TGCGAAGAGG TGTGCCCGAC GGCGGCGATC AAACTGTCGC AAGAGTACGA ACTGGCAGTG
TGGAAGAAAG AAGATTTCCT GCAACAGTCC CGCTTCGCGC TGTGCAACTG TCGCGTGTGT
AATCGTCCTT TCGCGGTACA GAAAGAGATC GACTACGCCA TTGCGCTGCT TGCGCACAAC
GGCGACAGCC GCGCGGAAAA CCACCGCGAA AGCTTTGAGA CCTGCCCGGA CTGTAAGCGT
CAGAAATGCC TGGTGCCGTC CGACCGTATT GAACTGACTC GCCATATGAA AGAGGTCAGC
TAA
|
|---|
| Protein sequence | MFTFIKKVIK TGTATSSYPL EPIAVDKNFR GKPEHNPQQC IGCAACVNAC PSNALTVETD
LATNELAWQF NLGRCIFCGR CEEVCPTAAI KLSQEYELAV WKKEDFLQQS RFALCNCRVC
NRPFAVQKEI DYAIALLAHN GDSRAENHRE SFETCPDCKR QKCLVPSDRI ELTRHMKEVS
|
|---|
| |