Gene SeD_A3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3152 
Symbol 
ID6873466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3034513 
End bp3035058 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content56% 
IMG OID642786173 
Productelectron transport protein HydN 
Protein accessionYP_002216814 
Protein GI198243613 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0528498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT TCATCATTGC AGACGCGAGT AAGTGCATTG GTTGCCGTAC CTGTGAAGTG 
GCTTGCGTCG TATCCCATCA GGAAAATCAG GATTGCGCAT CGCTGACCCC TGAAACCTTT
TTACCTCGTA TCCATGTCAT CAAAGGCGTG AATGTTTCCA CGGCAACGCT GTGTCGCCAG
TGTGAAGACG CGCCGTGCGC CAACGTTTGC CCGAATGGCG CCATCAGCCG TGACAAAGGT
TTTGTTCATG TGATGCAGGA ACGTTGCATT GGCTGTAAAA CTTGCGTAGT GGCATGTCCT
TACGGCGCCA TGGAAGTGGT GGTACGTCCG GTGGTTCGCA ATAGCGGCGC GGGGCTGAAC
GTGCGTGCCG AAAAAGCCGA AGCCAACAAG TGCGATCTGT GTCACCACCG TGAATCCGGT
CCGGCCTGTA TGGCCGCTTG CCCAACGCAC GCCCTCATCT GCGTTGACCG CAATAAGCTC
GAACAGCTGA GCGCGGAAAA ACGCCGTCGT GCGGCGCTGG ATTCAACGGC ATCGCTGCTT
TTCTGA
 
Protein sequence
MNRFIIADAS KCIGCRTCEV ACVVSHQENQ DCASLTPETF LPRIHVIKGV NVSTATLCRQ 
CEDAPCANVC PNGAISRDKG FVHVMQERCI GCKTCVVACP YGAMEVVVRP VVRNSGAGLN
VRAEKAEANK CDLCHHRESG PACMAACPTH ALICVDRNKL EQLSAEKRRR AALDSTASLL
F