| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3151 |
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| Symbol | hypF |
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| ID | 6875040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 3032127 |
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| End bp | 3034367 |
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| Gene Length | 2241 bp |
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| Protein Length | 746 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642786172 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_002216813 |
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| Protein GI | 198244103 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.114477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATAG ACACACCTTC CGGCGTACAG CTACGCATTC GGGGCAAAGT ACAGGGCGTC
GGTTTTCGTC CTTTTGTCTG GCAGCTGGCG CAGCAGTTGC AATTACACGG CGACGTGTGT
AATGACGGCG ACGGCGTCGT CGTTCGGCTG CTGGAAGATC CGTCGCAATT TATTGCCGCG
CTCTATCAGG ATTGCCCGCC GCTGGCGCGC ATTGACAGCG TTGAACACGC GTCGTTGGTA
TGGGAGCGCG CACCGAGGGA TTTCACCATT CGTCAGAGCG CAGGCGGTTC GATGAACACG
CAAATCGTGC CGGATGCGGC GACCTGCCCG GCATGTCTTG CCGAGATGAA TACCCCAGGC
GAGCGGCGCT ACCGTTATCC TTTCATCAAT TGCACCCACT GCGGACCACG CTTCACCATT
ATTCGCGCTA TGCCCTATGA CCGGCCATTT ACGGTGATGG CGGCGTTTCC CTTGTGTCCG
GAATGCGACA GCGAATACCG GGATCCGTAC GATCGCCGTT TTCATGCCCA GCCCGTTGCC
TGTCCGTCAT GCGGGCCGCA TCTTGAGTGG CGGAGCCAAC ATGAACGAGC GGAAAAAGAG
GCGGCTTTGC AGGCGGCGGT CGCCCAACTG AACGCCGGAG GCATTATTGC CGTTAAAGGG
CTGGGTGGTT TTCATCTGGC CTGCGACGCG CGCAACGATA ACGCAGTGGC GATGCTGCGG
GCGCGTAAAC ATCGTCCGGC GAAACCATTG GCGGTGATGT TGCCCACGGC GCAAACGCTG
CCGACCGCGG CGCGTTCGCT GCTGACCACG CCAGCGGCCC CGATTGTGCT GGTGGATAAG
CAGTATATAC CTTCGCTGAG TGAGGGCATC GCGCCAGGAC TTACGGAGGT GGGTGTGATG
CTGCCAGCCA ACCCATTGCA ACACCTCTTG TTGCAGGAGC TCAATTACCC GCTGGTGATG
ACATCCGGCA ACCTGAGCGG CAGACCGCCC GCCATCACCA ACGAACAGGC GCTGGACGAT
TTACACGATA TTGCCGATGG TTTTCTGTTG CACAATCGCG ACATTGTACA GCGCATGGAC
GACTCTGTCG TGCGCGACAG CGGCGAAATG CTGCGTCGTT CGCGGGGATA CGTGCCGGAC
GCGATTGCGT TGCCGCCCGG ATTTCGCGAT GTGCCGCCGA TACTTTGTCT GGGCGCGGAT
CTGAAAAACA CGTTCTGTCT GGTACGCGGC GAACAGGCGG TTGTCAGCCA GCATTTAGGC
GATCTCAGCG ATGACGGTAT CCAGGCGCAG TGGCGCGAGG CATTGCGTCT GATCCAGTCA
ATCTACGATT TTACCCCAGA GCGTATCGTC TGTGATGCGC ATCCGGGCTA TGTTTCCAGT
CAGTGGGCCA GTGAGATGCG TCTGCCGACA GAGACGGTGT TACACCATCA TGCCCATGCG
GCGGCTTGCC TGGCCGAGCA TGGTTGGCCG CTGGACGGCG GAGAGGTGAT TGCCCTGACG
GTAGACGGTA TCGGCATGGG TGAGAATGGC GCGCTATGGG GCGGAGAATG TTTGCGGGTC
AATTATCGCG AATGCGAACA TTTAGGCGGT TTACCCGCCG TGGCGCTGCC GGGAGGCGAT
CTGGCTGCCA AACATCCGTG GCGTAATCTG TTGGCGCAGT GCCTGCGCTT TGTGCCGGAC
TGGCAGGATT ATCCGGAGAC AGCGGGGCTG CAACAGCAAA ACTGGAATGT CCTGGCGCGC
GCCATTGAGC GCGGCGTCAA TGCCCCATTG GCGTCTTCCT GCGGGCGGTT GTTTGACGCG
GTGGCTGCCG CGCTTCGCTG CGCGCCAGCA TCGCTTAGCT ATGAGGGCGA GGCCGCCTGC
GCGCTGGAGG CGCTGGCCTC TCAATGCGCT AACGTTGAGC ATCCGGTAAC GATGCCGCTT
AACGGCGCTC AACTGGACGT CGCTGTTTTC TGGCGGCAAT GGTTGAACTG GCAGGCCACG
CCCGCGCAAC GCGCCTGGGC TTTTCATGAT GCGCTGGCGT GCGGGTTTGC CACGCTAATG
CGCCAGCAGG CTACGGCGCG GGGGATAACC ACTCTGGTCT TCAGCGGCGG GGTGATACAC
AACCGCTTAC TTCGCGCGCG TCTTGCCTTT TATCTTTCTG ATTTTAAATT GTTATTTCCG
CAGCGGTTAC CAGCGGGCGA CGGCGGGCTG TCGTTTGGAC AGGGCGTGAT TGCCGCAGCG
CGAGCGTTAA GTGAAGTGTA G
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| Protein sequence | MAIDTPSGVQ LRIRGKVQGV GFRPFVWQLA QQLQLHGDVC NDGDGVVVRL LEDPSQFIAA
LYQDCPPLAR IDSVEHASLV WERAPRDFTI RQSAGGSMNT QIVPDAATCP ACLAEMNTPG
ERRYRYPFIN CTHCGPRFTI IRAMPYDRPF TVMAAFPLCP ECDSEYRDPY DRRFHAQPVA
CPSCGPHLEW RSQHERAEKE AALQAAVAQL NAGGIIAVKG LGGFHLACDA RNDNAVAMLR
ARKHRPAKPL AVMLPTAQTL PTAARSLLTT PAAPIVLVDK QYIPSLSEGI APGLTEVGVM
LPANPLQHLL LQELNYPLVM TSGNLSGRPP AITNEQALDD LHDIADGFLL HNRDIVQRMD
DSVVRDSGEM LRRSRGYVPD AIALPPGFRD VPPILCLGAD LKNTFCLVRG EQAVVSQHLG
DLSDDGIQAQ WREALRLIQS IYDFTPERIV CDAHPGYVSS QWASEMRLPT ETVLHHHAHA
AACLAEHGWP LDGGEVIALT VDGIGMGENG ALWGGECLRV NYRECEHLGG LPAVALPGGD
LAAKHPWRNL LAQCLRFVPD WQDYPETAGL QQQNWNVLAR AIERGVNAPL ASSCGRLFDA
VAAALRCAPA SLSYEGEAAC ALEALASQCA NVEHPVTMPL NGAQLDVAVF WRQWLNWQAT
PAQRAWAFHD ALACGFATLM RQQATARGIT TLVFSGGVIH NRLLRARLAF YLSDFKLLFP
QRLPAGDGGL SFGQGVIAAA RALSEV
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