Gene SeD_A3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3129 
Symbol 
ID6873912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp3013651 
End bp3014217 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content57% 
IMG OID642786150 
Productfructose-1-phosphatase 
Protein accessionYP_002216796 
Protein GI198243799 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000901286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.0148605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCAC GTTATGCTGG TTTGATTTTT GATATGGACG GTACTCTCCT GGATACCGAA 
CCCACGCATC GCAAAGCGTG GCGTGAGGTT TTGGGGCGCT ATGGTCTTCG TTTTGATGAA
CAGGCAATGG TCGCGCTTAA CGGTTCGCCA ACCTGGCTTA TCGCCCAGTC AATCATTGAG
CTTAACCATG CCGATCTTGA TCCCCTGTCA CTGGCGCGTG AGAAAACCGA CGCGGTAAAA
AGCATCCTGC TGGACTGCGT AGAACCGCTG CCGCTGGTTG AGGTGGTCAA AGCGTGGCAT
GGGCGGCGTC CCATGTCGGT CGGTACCGGT AGCGAAAGCG CTATCGCGGA AGCCTTGTTA
GCGCATCTGG GGCTGCGTCG TTATTTTGAT GCGGTTGTGG CGGCAGATCA CGTACAGCAT
CACAAACCCG CGCCTGACAC CTTCCTACTG TGCGCCCAGC GGATGGGCGT CATGCCGACG
CAGTGCGTGG TATTTGAAGA TGCCGATTTT GGTTTACAGG CGGCGCGGGC GGCGGGAATG
GATGCCGTGG ATGTCCGACT ATTGTGA
 
Protein sequence
MYARYAGLIF DMDGTLLDTE PTHRKAWREV LGRYGLRFDE QAMVALNGSP TWLIAQSIIE 
LNHADLDPLS LAREKTDAVK SILLDCVEPL PLVEVVKAWH GRRPMSVGTG SESAIAEALL
AHLGLRRYFD AVVAADHVQH HKPAPDTFLL CAQRMGVMPT QCVVFEDADF GLQAARAAGM
DAVDVRLL