Gene SeD_A3128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3128 
Symbol 
ID6872040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp3013229 
End bp3013654 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content53% 
IMG OID642786149 
Producthypothetical protein 
Protein accessionYP_002216795 
Protein GI198244519 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00306238 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.0197186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGACG GACTGTCACT CCTGTCTCTG TTTGCCAGTA GTTTTCTCAG CGCGACGCTG 
TTATCCGGTA ATTCTGAGGT GGTTTTGGTT GCTATGCTGG TCTCCGGCGT CAGTCATCCC 
TGGGTCTTAG TCTTAACAGC AACAATGGGT AATAGCCTTG GAGGGGTAAC TAACGTTATT 
CTTGGGCGTT TCTTTCCGCT GCGCAAAACG TCGCGCTGGC AGGAAAAAGC GACTGGCTGG 
CTAAAGCGTT ATGGCGCAGC CACACTATTA TTAAGCTGGA TGCCGGTCAT CGGTGATTTG 
TTGTGCCTGT TAGCGGGATG GATGCGCATC CCGTGGGGGC GGACGATCTT TTTTTTGTGT 
CTTGGTAAGG CGCTGCGCTA TGTTGCGCTC GCAGCGGCGA CGGTTCAGGG CATGATGTGG 
TGGTAA
 
Protein sequence
MSDGLSLLSL FASSFLSATL LSGNSEVVLV AMLVSGVSHP WVLVLTATMG NSLGGVTNVI 
LGRFFPLRKT SRWQEKATGW LKRYGAATLL LSWMPVIGDL LCLLAGWMRI PWGRTIFFLC 
LGKALRYVAL AAATVQGMMW W