| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3116 |
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| Symbol | |
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| ID | 6874832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 3001807 |
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| End bp | 3002871 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642786140 |
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| Product | glycine betaine transporter membrane protein |
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| Protein accession | YP_002216786 |
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| Protein GI | 198245962 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.334495 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGATC AAACGAATCC GTGGGATACC GCACAGGTGG CCGATACTAC GACGCAAACG
GCTGATGCCT GGGGAACACC GGCAGGCGTA GCCACGGACG GCGGTAGTAC CGACTGGTTG
AACAGCGCGC CCGCGCCAGC CCCTGAACAC TTTTCTCTTC TGGACCCGTT CCATAAGACG
CTGATCCCGC TGGATAGCTG GGTCACAGAG GGAATCGACT GGGTCGTCAC CCATTTCCGT
CCCCTTTTTC AGGGGATTCG TGTGCCGGTG GATTACATCC TCAACGGCTT TCAGCAACTG
CTGCTGGGAA TGCCCGCCCC TGTGGCGATT ATTCTCTTTG CGCTGATTGC CTGGCAGGTT
TCCGGCGTGG GCATGGGGAT CGCGACGCTG ATATCGCTGA TCGCGATCGG CGCGATCGGT
GCCTGGTCGC AGGCGATGAT TACCCTGGCG CTGGTGTTGA CCGCCCTGTT GTTCTGCGTC
GTGATCGGAT TACCGATGGG AATCTGGCTG GCGCGCAGCC CGCGTGCGGC CAAAATAGTT
CGTCCGCTGC TGGATGCGAT GCAGACCACG CCCGCGTTTG TCTATCTGGT GCCGATTGTC
ATGTTATTCG GCATCGGTAA CGTGCCGGGC GTGGTGGTGA CGATTATTTT TGCTCTACCG
CCGATTGTAC GCCTGACGAT CTTGGGCATT AACCAGGTGC CTGCCGACTT AATTGAAGCG
TCGCGCTCGT TCGGCGCCAG CCCGCGCCAA ATGTTGTTCA AAGTGCAACT ACCGCTGGCG
ATGCCCACCA TTATGGCAGG CGTTAATCAG ACGCTGATGC TGGCTCTCTC GATGGTCGTC
ATCGCCTCGA TGATTGCGGT CGGCGGACTT GGCCAGATGG TACTACGCGG CATTGGTCGT
CTTGATATGG GGCTGGCAAC CGTCGGCGGC GTCGGCATTG TGATTCTCGC CATCATTCTG
GACCGTCTGA CGCAGGCCGT CGGGCGCGAC TCGCGTAGCC GCGGTAACCG TCGCTGGTAT
ACCACCGGTC CTGTTGGGCT AATCACCCGC CCTTTCGTTA AGTAA
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| Protein sequence | MADQTNPWDT AQVADTTTQT ADAWGTPAGV ATDGGSTDWL NSAPAPAPEH FSLLDPFHKT
LIPLDSWVTE GIDWVVTHFR PLFQGIRVPV DYILNGFQQL LLGMPAPVAI ILFALIAWQV
SGVGMGIATL ISLIAIGAIG AWSQAMITLA LVLTALLFCV VIGLPMGIWL ARSPRAAKIV
RPLLDAMQTT PAFVYLVPIV MLFGIGNVPG VVVTIIFALP PIVRLTILGI NQVPADLIEA
SRSFGASPRQ MLFKVQLPLA MPTIMAGVNQ TLMLALSMVV IASMIAVGGL GQMVLRGIGR
LDMGLATVGG VGIVILAIIL DRLTQAVGRD SRSRGNRRWY TTGPVGLITR PFVK
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