| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3113 |
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| Symbol | |
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| ID | 6872879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2997143 |
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| End bp | 2999287 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642786137 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_002216783 |
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| Protein GI | 198245896 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.678613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAACAA CTATCCCGGA GCGCGTAATG CAGGAAACCA TGGATTACCA CGCCCTGAAC
GCGATGCTGA ATCTTTACGA TAAAGCAGGC CATATTCAGT TCGACAAGGA CCAGCAGGCG
ATCGACGCCT TCTTTGCCAC CCACGTCCGC CCGCATTCCG TGACGTTTGC CAGCCAGCAT
GAACGTCTGG AGACGCTGGT TCGGGAAGGG TATTACGATG ACGCTGTCCT CGCGCGTTAC
GACCGCGCCT TCGTCCTCCG CCTGTTCGAG CACGCCCACG CCAGCGGCTT TCGCTTCCAG
ACGTTTCTTG GCGCCTGGAA GTTCTATACC AGTTACACGC TGAAAACCTT CGACGGCAAA
CGTTATCTGG AACACTTTGA AGATCGGGTG ACAATGGTGG CGTTGACGCT GGCGCAGGGT
GACGAAACGC TGGCCACCCA ACTGACCGAT GAAATGCTTT CTGGTCGCTT TCAGCCCGCC
ACCCCGACTT TTTTAAATTG CGGTAAACAG CAGCGTGGGG AACTGGTCTC CTGCTTCCTG
CTCCGTATCG AAGACAACAT GGAGTCGATC GGGCGGGCGG TGAATTCGGC GCTGCAACTC
TCCAAACGCG GCGGCGGCGT CGCGTTTTTA CTCTCCAATC TGCGCGAGGC GGGCGCGCCG
ATCAAACGCA TTGAGAATCA GTCTTCCGGC GTGATCCCGG TGATGAAAAT GCTGGAAGAC
GCGTTTTCGT ATGCCAACCA GCTTGGCGCG CGCCAGGGGG CCGGCGCGGT TTATCTCCAT
GCGCACCACC CGGATATTCT GCGTTTTCTG GATACCAAAC GGGAAAACGC TGACGAAAAA
ATCCGGATCA AAACGCTCTC TCTCGGCGTG GTGATCCCGG ACATCACCTT CCGGCTGGCG
AAAGAAAACG CGCAAATGGC GCTCTTTTCG CCCTATGACG TACAACGACG CTACGGCAAA
CCGTTTGGCG ATATCGCCAT TAGCGAACGG TACGATGAAT TAATTGCCGA TCCGCACGTG
CGTAAAACCT ATATTAACGC CCGTGACTTT TTTCAAACAC TGGCGGAGAT TCAGTTCGAA
TCCGGGTATC CCTACATCAT GTTTGAAGAT ACGGTAAACC GCGCGAATCC CATTGCTGGG
CGCATTAATA TGAGCAACCT GTGCTCGGAA ATTTTACAGG TCAATAGCGC CTCCCGTTAC
GACGATAACC TTGACTATAC CCACATCGGG CATGACATTT CCTGCAATCT CGGCTCGCTG
AATATCGCTC ACGTCATGGA TTCACCGGAC ATTGGTCGTA CCGTAGAAAC CGCTATTCGC
GGCCTGACGG CGGTGTCGGA CATGAGCCAT ATACGCAGCG TACCCTCAAT AGCCGCCGGT
AATGCCGCCT CTCATGCCAT CGGTCTGGGC CAGATGAATC TGCATGGCTA TCTGGCGAGA
GAAGGCATTG CCTACGGTTC GCCGGAGGCG TTGGATTTCA CCAATCTCTA TTTTTACACC
ATTACCTGGC ATGCCGTGCA TACTTCAATG CGGCTGGCCC GCGAACGCGG CAAAACCTTC
GCCGGATTTG CGCAGTCGCG CTATGCCAGC GGCGACTATT TTACGCAGTA TTTACAGGAC
GACTGGCAAC CGAAAACGGC GAAAGTCAGA ACGCTATTTG CCCGCAGCGG CATTACGCTG
CCCACACGAG AAATGTGGCT AAAGCTGCGC GACGATGTGA TGCGCTATGG CATCTATAAC
CAAAATTTGC AGGCGGTGCC GCCGACCGGT TCGATTTCTT ACATTAATCA TGCGACCTCC
AGCATTCATC CGATTGTGGC CAAAATTGAG ATTCGCAAAG AGGGCAAAAC CGGGCGTGTG
TATTACCCCG CGCCGTTTAT GACCAATGAA AATCTGGACA TGTATCAGGA TGCTTACGAT
ATCGGTCCGG AAAAAATTAT TGATACCTAT GCCGAGGCCA CGCGCCACGT CGATCAAGGA
CTGTCGCTCA CCCTGTTTTT CCCCGATACC GCCACGACCC GCGATATCAA CAAAGCGCAG
ATCTATGCCT GGCGAAAAGG TATTAAGTCA CTGTATTACA TCCGGCTTCG CCAGTTGGCG
CTGGAAGGTA CTGAAATTGA AGACTGCGTA TCCTGCGCGC TATAA
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| Protein sequence | MATTIPERVM QETMDYHALN AMLNLYDKAG HIQFDKDQQA IDAFFATHVR PHSVTFASQH
ERLETLVREG YYDDAVLARY DRAFVLRLFE HAHASGFRFQ TFLGAWKFYT SYTLKTFDGK
RYLEHFEDRV TMVALTLAQG DETLATQLTD EMLSGRFQPA TPTFLNCGKQ QRGELVSCFL
LRIEDNMESI GRAVNSALQL SKRGGGVAFL LSNLREAGAP IKRIENQSSG VIPVMKMLED
AFSYANQLGA RQGAGAVYLH AHHPDILRFL DTKRENADEK IRIKTLSLGV VIPDITFRLA
KENAQMALFS PYDVQRRYGK PFGDIAISER YDELIADPHV RKTYINARDF FQTLAEIQFE
SGYPYIMFED TVNRANPIAG RINMSNLCSE ILQVNSASRY DDNLDYTHIG HDISCNLGSL
NIAHVMDSPD IGRTVETAIR GLTAVSDMSH IRSVPSIAAG NAASHAIGLG QMNLHGYLAR
EGIAYGSPEA LDFTNLYFYT ITWHAVHTSM RLARERGKTF AGFAQSRYAS GDYFTQYLQD
DWQPKTAKVR TLFARSGITL PTREMWLKLR DDVMRYGIYN QNLQAVPPTG SISYINHATS
SIHPIVAKIE IRKEGKTGRV YYPAPFMTNE NLDMYQDAYD IGPEKIIDTY AEATRHVDQG
LSLTLFFPDT ATTRDINKAQ IYAWRKGIKS LYYIRLRQLA LEGTEIEDCV SCAL
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