Gene SeD_A3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3100 
Symbol 
ID6873977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2991012 
End bp2991539 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content56% 
IMG OID642786124 
Productinner membrane protein YgaP 
Protein accessionYP_002216770 
Protein GI198244092 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.5055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATTG GGATAGTTTC CCCCCGTGAG GCGCAAGCGC TGATAGCGCA AGGCGCGAAA 
CTGATTGATG TACGCGACGC CGACGAATAT CTGCGCGAGC ATATTCCACA TGCGCAACTG
GCGCCGCTTT CCCGGCTTGA ACAGGGCGAT TTGCCCGCCA ACCTGCGAGC GGAACAGATT
ATTTTTCACT GTCAGTCAGG TAAACGAACC AGCAGCAATG CAGCAAAACT ACAGGCCATT
GCCGCCCCAG CTCAGGTCAG TCTACTGGAA GGCGGTATCG ACGGATGGAA AGCGGCAGGA
TTGCCCGTCA CAGAAGACAA ATCGCAACCG TTGCCACTGA TGCGTCAGGT GCAAATCGCC
GCCGGCGGGT TGACGTTGCT TGGGGTGATT CTGGGCTATA CGGTCCACGG CGGCTTTTTC
CTCATTAGCG GTTTTGTCGG GGCCGGGTTA ATGCTGGCAG GCATGACCGG CTTCTGCGGA
ATGGCGCGAC TACTGGAAAA AATGCCCTGG AATACCCGTA CTCATTAA
 
Protein sequence
MSIGIVSPRE AQALIAQGAK LIDVRDADEY LREHIPHAQL APLSRLEQGD LPANLRAEQI 
IFHCQSGKRT SSNAAKLQAI AAPAQVSLLE GGIDGWKAAG LPVTEDKSQP LPLMRQVQIA
AGGLTLLGVI LGYTVHGGFF LISGFVGAGL MLAGMTGFCG MARLLEKMPW NTRTH