Gene SeD_A3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3091 
Symbol 
ID6871242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2983538 
End bp2984806 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content59% 
IMG OID642786117 
Producthydroxyglutarate oxidase 
Protein accessionYP_002216763 
Protein GI198245579 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.854212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones72 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGATT TTGTGATTAT CGGCGGCGGC ATTATCGGCA TGTCGACCGC CATGCAACTT 
ATTGATGTCT ACCCGGATGC GCGCATCGCA TTGCTGGAAA AAGAGTCCGC GCCAGCCTGC 
CACCAGACCG GGCATAACAG CGGCGTGATC CATGCCGGGG TGTACTACAC GCCCGGCAGC 
CTCAAAGCGC GGTTTTGTCT GGCGGGCAAT CAGGCGACCA AAACCTTTTG CGATCAAAAC 
AACATCCGCT ACGACACCTG CGGCAAAATG TTGGTCGCCA CCTCGGAGCT GGAAATGGCG 
CGGATGCGCG CGCTATGGGA GCGGACGGCG GCCAACGGCT TAGAGCGCGA GTGGTTAAGC 
GCGGCGGAGC TGCGTGAACG CGAACCCAAT ATCATTGGCC TGGGCGGGAT TTTTGTCCCT 
TCCAGCGGGA TTGTCAGCTA TCGCGATGTC GCGACGGCCA TGGCGAACCG CTTTCAGGCC 
AAAGGCGGCG AGATCATCTA CCATGCCGAG GTCAGCGCGC TAACAGAACA TGCCGCTGGC 
ATTGTTATTC GCACCTCGCA AGGTCGGGAA ATAGAAACCG CTACGCTTAT CGGCTGTGCA 
GGGCTGATGG CGGATCGGCT GGTCAAAATG CTGGGCGTGG AGCCCGGTTT TATTATCTGC 
CCTTTCCGCG GCGAGTACTT TCGTCTGGCC CCGCGACACA ACCGGATCGT TAACCATTTG 
ATCTACCCGA TCCCCGATCC GGCAATGCCG TTTCTCGGCG TCCATCTTAC CCGCATGATC 
GATGGCAGCG TCACGGTCGG GCCGAATGCG GTGCTGGCGC TTAAACGCGA AGGCTACCGT 
AAGCGCGACG TTTCCTTCAC CGACACCCTA GAGATTTTCC GCTCCGCCGG CATTCGCCGC 
GTACTGCAAA ACCATCTGCT TTCCGGGCTG GGCGAGATGA AAAACTCGCT GTGCAAAAGC 
GGCTATTTGC GGCGAGTACA AAAGTATTGC CCCAGCCTGA CCGTCAACGA TCTCCAGCCC 
TGGCCGGCAG GCGTGCGGGC GCAGGCGGTT TCACCGGACG GCAAACTGAT TGATGATTTT 
CTGTTTGTCA CGACGCCGCG TTCCATTCAC ACCTGTAACG CCCCCTCCCC GGCGGCGACA 
TCCGCGATAC CTATCGGCGC GCATATCGTC AGTAAAGTTC AGGCGCTACG CGCAAGCCAG 
AGCAACCCCG GACGTACGCT GCGTGCGGCA CGCAGCGTGG ACGCATTACA CGCCGCATTT 
ACCCGTTAA
 
Protein sequence
MYDFVIIGGG IIGMSTAMQL IDVYPDARIA LLEKESAPAC HQTGHNSGVI HAGVYYTPGS 
LKARFCLAGN QATKTFCDQN NIRYDTCGKM LVATSELEMA RMRALWERTA ANGLEREWLS 
AAELREREPN IIGLGGIFVP SSGIVSYRDV ATAMANRFQA KGGEIIYHAE VSALTEHAAG 
IVIRTSQGRE IETATLIGCA GLMADRLVKM LGVEPGFIIC PFRGEYFRLA PRHNRIVNHL 
IYPIPDPAMP FLGVHLTRMI DGSVTVGPNA VLALKREGYR KRDVSFTDTL EIFRSAGIRR 
VLQNHLLSGL GEMKNSLCKS GYLRRVQKYC PSLTVNDLQP WPAGVRAQAV SPDGKLIDDF 
LFVTTPRSIH TCNAPSPAAT SAIPIGAHIV SKVQALRASQ SNPGRTLRAA RSVDALHAAF 
TR