Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3083 |
Symbol | |
ID | 6872588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2977053 |
End bp | 2978468 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642786111 |
Product | tricarboxylic transporter regulatory protein |
Protein accession | YP_002216757 |
Protein GI | 198244981 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTGGG TTAAGCCGCA ATCGTTGTAC CTGCAACTCT TACTGTTCCT GGGGTTGCCG CTGATTCTGC TATGGGGGCT GTCGGCGTTT AACAGCTATG TCAATGCGCT ACAGGCCGCC ACTCAGGCTT ATGATCGTAC GTTGCTCTCC TCGGCGCGAA CGGTATCGGA ACGGCTGGTG GTGCGCAATA ACCATCTGGA AGTTAACGTG CCCTGGGTGG TGCTGGATAG CTTCGAGCTT AATATGAATG ATCGACTCTA TTACAAAGTC GTCGACCCTT CCGGAAAGGT CATTTCCGGT TATGACGATC TGCCCGTCAT GCCGCCCGCT ACGCCCCGTA CCCGGCTTTA TCCGGCGCTG GCGTGGTTCT ATCATACCGA GTATCGCGGC GAGGCGATCC GCGTGGCGCG TTTGCTACAG CCGGTCAACG AAGGCGGCAT TATCGGCATG GCGGAGATTT ATGTCGCAGA GACGCTGCAG TCCCGTCGTT ATCTGGCGGG CCAACTGCTG TTCTCTTCCT GGATCTCACA GGGGCTGCTG GTGTTGCTGA CCCTGGTGCT GGTTGGCTGG TTATTACGCC GGATCCTGCG CCCTATGCGT CAACTTTCGT CATTAATGGT ACGCCGCGAA CCGGGTCTGT TAACGCCGCT GCCGGAACTG CTGCCGTGGT CGGAAACACG CTTGTTAATC GTGGCGTTTA ATCGCTACAT TGACAGGCTC CGCGGCATTC TCTCCCGGCA GGAACGCTTT AGTGCCGATG CTTCTCACCA GTTAAAAACG CCGCTGGCGG TGTTAAAAAC GCAGGCGGCG GTGGCGTTAG CCAGCCAGCA CCCTCATCAT TGGTACGAAA GTCTGCAGGC GATGAGCGTA ACGCTGGATA GTACCATTCA GCTCACGGAA AGATTGTTGC AACTTTCTGC GGTAAAGCAT AAAGAGCAGG GCGAGCGGCG CTTTTCCCCG GTGAATCTGT ACGATATCGT ACAGAGCGGC TGCTTTACCC GCCTGGCGCA GGCGCGGAGT AAACATATCG ACCTGGGCTA CGAAGGCGAA CAGGAAGCGA TGTGGATCGA GGGGGATGAG GTACTGCTTA GCGAGCTATG CGGAAACTTG CTGGATAATG CGCTGAAATA CACGCCTGAG CAAGGTATCG TCACCGCGCG GCTTGAACGG GATGGCGATG CCGTGACGCT GGTTGTCGAA GATAGCGGCC CCGGCATTGA TGATGAACAC ATCCATCTGG CGCTACAGCC GTTCCACCGG CTCGATAACG TAGGAAATGT GGCCGGGGCG GGCATTGGTC TGGCTTTGGT CAATGATATT GCACGCCTGC ACCGTACTCA TCCCCATTTT TCCCGTAGTG AAGCGTTGGG AGGGTTATAC GTTCGGATAC GCTTTTTAAG CCTTGTTCCG CAGTAA
|
Protein sequence | MKWVKPQSLY LQLLLFLGLP LILLWGLSAF NSYVNALQAA TQAYDRTLLS SARTVSERLV VRNNHLEVNV PWVVLDSFEL NMNDRLYYKV VDPSGKVISG YDDLPVMPPA TPRTRLYPAL AWFYHTEYRG EAIRVARLLQ PVNEGGIIGM AEIYVAETLQ SRRYLAGQLL FSSWISQGLL VLLTLVLVGW LLRRILRPMR QLSSLMVRRE PGLLTPLPEL LPWSETRLLI VAFNRYIDRL RGILSRQERF SADASHQLKT PLAVLKTQAA VALASQHPHH WYESLQAMSV TLDSTIQLTE RLLQLSAVKH KEQGERRFSP VNLYDIVQSG CFTRLAQARS KHIDLGYEGE QEAMWIEGDE VLLSELCGNL LDNALKYTPE QGIVTARLER DGDAVTLVVE DSGPGIDDEH IHLALQPFHR LDNVGNVAGA GIGLALVNDI ARLHRTHPHF SRSEALGGLY VRIRFLSLVP Q
|
| |