Gene SeD_A3075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3075 
Symbol 
ID6873054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2968283 
End bp2970457 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content51% 
IMG OID642786104 
Productouter membrane receptor FepA 
Protein accessionYP_002216750 
Protein GI198245257 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4771] Outer membrane receptor for ferrienterochelin and colicins 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.203578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA ATAAGTTCCT CTGGTTAATA ACCGTGGTTT CTACAGGGGT TAATAGTCCA 
TTATCAGCAG CAGAATCTAC AGACGACAAC GGCGAAACGA TGGTGGTTGA ATCCACTGCC
GAGCAAGTAT TAAAGCAACA GCCGGGCGTT TCGATTATTA CTCGTGACGA TATTCAGAAG
AATCCTCCCG TTAACGATCT TGCCGATATT ATTCGTAAGA TGCCTGGGGT TAATCTTACC
GGCAATAGCG CCTCGGGGAC GCGCGGAAAT AACCGACAAA TTGATATTCG TGGTATGGGG
CCGGAAAATA CCTTAGTGCT GATTGACGGC GTGCCGGTGA CGTCACGAAA TTCGGTTCGC
TATAGCTGGC GCGGAGAACG CGACACCCGT GGCGATACGA ACTGGGTACC GCCGGAGATG
GTAGAACGTA TTGAAGTGAT CCGTGGGCCC GCCGCCGCGC GCTATGGCTC CGGTGCCGCT
GGCGGGGTGG TGAATATCAT CACCAAACGT CCGACTAACG ACTGGCATGG TTCGCTGTCG
CTCTATACCA ACCAGCCGGA AAGCAGCAAA GAAGGTGACA CCCGGCGGGG TAACTTTAGC
CTTAGCGGCC CGTTGGCTGG AGATACGTTG ACGATGCGTC TGTACGGTAA TCTCAACAGA
ACCGATGCCG ACAGCTGGGA TATTAACTCC TCCGCCGGTA CCAAGAATGC CGCCGGACGG
GAGGGGGTCA CCAATAAAGA TATTAATAGC GTCTTCTCAT GGAAAATGAC CCCGCAGCAA
ATCCTTGATT TTGAAGCGGG ATACAGTCGG CAGGGGAATA TCTATGCCGG CGATACGCAA
AACAGTACTT CGAACGCGGT TACTAAAAGT CTGGCGCAGT CCGGGCGGGA GACCAATCGC
CTGTACCGGC AGAATTACGG TCTAACTCAT AACGGCATCT GGGACTGGGG GCAAAGCCGC
CTGGGGTTCT ACTATGAAAA AACCGATAAT ACCCGCATGA ATGAGGGACT CTCCGGCGGC
GGCGAGGGGC GCATTACCAA CGACCAGACG TTCACCACTA ACCGCCTGAT CTCGTATCGC
ACCAGCGGCG AGGTGAATGT CCCGGTGATA TGGCTATTTG AGCAAACGCT CACCGTCGGC
GCGGAGTGGA ACCGCGATGA GCTGAACGAT CCTTCCTCTA CCAGTCTGAC GGTTAAGGAT
AGCAATATCG CCGGGATTCC CGGTTCGGCG GCTAACCGTA GCAGCAAAAA TAAATCGGAA
ATCAGTGCGC TGTACGTTGA AGATAATATC GAACCCATGG CCGGTACCAA TATTATTCCG
GGTCTGCGTT TTGACTATTT GAGCGAATCC GGGAGTAATT TTAGTCCCAG TCTTAACCTT
TCCCAGGAGT TAGGTGAATA CGTCAAGGTG AAAGCCGGTA TTGCCCGGGC CTTTAAGGCA
CCGAACTTGT ATCAAACCAG TGAGGGGTAT TTACTCTATT CGAAAGGCAA CGGTTGTCCA
AAAGATATTA CGTCAGGCGG CTGTTACCTG GTCGGTAATA AGAACCTCGA TCCTGAAATT
AGTATCAATA AAGAGATTGG GCTGGAATTT ACCGTAGACG ATTATCACGC AAGCGTAACG
TATTTCCGTA ACGATTATCA GAATAAGATT GTCGCAGGTG ATCAGATTAT TGGCAGAAGC
GCATCTGGCG CTTATGTATT GCAGTGGCAG AACGGCGGTA AAGCGCTGAT TGAAGGTATT
GAAGCCAGCA TGGCTGTTCC GCTGATGCCG GACCGTCTGA ACTGGAATAC CAATGCGACT
TATATGATCA CTTCTGAGCA AAAAGATACC GGTAATCCCT TATCGATAAT CCCGAAATAT
ACGGTGAATA CCTTCCTCGA CTGGACTATC ACCAGCGCGC TCTCCGCTAA CGTCAACTGG
ACGTTATACG GCAAGCAAAA ACCGCGAACA CATGCGGAGT CGCGTAGTGA AGAGACCAAA
GGATTGTCCG GGAAAGCGCT GGGGGCTTAC TCACTGGTCG GCGCTAACGT TAACTACGAT
ATCAATAAGA ACCTGCGTCT TAATGTCGGT ATCAGCAATA TCTTCGATAA ACAGATCTAT
CGCTCCGCCG AAGGGGCAAA TACCTATAAC GAACCGGGTC GGGCTTATTA TGCCGGTGTG
ACGGCCTCGT TTTGA
 
Protein sequence
MKVNKFLWLI TVVSTGVNSP LSAAESTDDN GETMVVESTA EQVLKQQPGV SIITRDDIQK 
NPPVNDLADI IRKMPGVNLT GNSASGTRGN NRQIDIRGMG PENTLVLIDG VPVTSRNSVR
YSWRGERDTR GDTNWVPPEM VERIEVIRGP AAARYGSGAA GGVVNIITKR PTNDWHGSLS
LYTNQPESSK EGDTRRGNFS LSGPLAGDTL TMRLYGNLNR TDADSWDINS SAGTKNAAGR
EGVTNKDINS VFSWKMTPQQ ILDFEAGYSR QGNIYAGDTQ NSTSNAVTKS LAQSGRETNR
LYRQNYGLTH NGIWDWGQSR LGFYYEKTDN TRMNEGLSGG GEGRITNDQT FTTNRLISYR
TSGEVNVPVI WLFEQTLTVG AEWNRDELND PSSTSLTVKD SNIAGIPGSA ANRSSKNKSE
ISALYVEDNI EPMAGTNIIP GLRFDYLSES GSNFSPSLNL SQELGEYVKV KAGIARAFKA
PNLYQTSEGY LLYSKGNGCP KDITSGGCYL VGNKNLDPEI SINKEIGLEF TVDDYHASVT
YFRNDYQNKI VAGDQIIGRS ASGAYVLQWQ NGGKALIEGI EASMAVPLMP DRLNWNTNAT
YMITSEQKDT GNPLSIIPKY TVNTFLDWTI TSALSANVNW TLYGKQKPRT HAESRSEETK
GLSGKALGAY SLVGANVNYD INKNLRLNVG ISNIFDKQIY RSAEGANTYN EPGRAYYAGV
TASF