| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3072 |
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| Symbol | |
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| ID | 6871879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2962270 |
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| End bp | 2965926 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642786101 |
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| Product | ATP binding cassette |
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| Protein accession | YP_002216747 |
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| Protein GI | 198245961 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA CTCATTCCCC CATGCCCGCT CGTGCCTGGA TAGTTCGCCT TGCCCGCGTG
TGTTGGGAAC GTAAAACACT GAGCATCATT GTCATCGTAG CATCAGTATC GACCATTTTA
CTGGCTGCGC TGACGCCGCT AATAACGCGT CAGGCCGTCA ATGACGCGAT AGCAGGCGAT
ACGACCCACC TGCCGTTACT TGCCTGCGGC CTGCTGTTAA TTGCCCTTTT TGATTTTATC
GGGAATTACG TGCGCCGCGG CTATGCCGGG GAACTCTCGC TGTGGGTTCA GCATACGTTA
CGTAGCCGTG CGTTCGACAG TATTCAAAAA CTGGACGGCG CAGGCCAGGA CGCCTTGCGT
ACCGGGCAGG TCATTTCGCG TACCAACAGC GATCTTCAAC AGGTACACAC CTTGCTACAG
ATGTGTCCGG TGCCGCTGGC GGTGCTCACT TACTATGTGG CCGGTATCGC GGTGATGCTA
TGGATGTCGC CATCCATGAC GCTTATCGTG ATTTGCGTAC TGGCCGCCCT TGCTATTACC
GCCCTGCGCG CCCGTCGCCG TGTTTTCGCA CAAACGGGGC TTGCCTCAGA CCGGCTGGCG
CACATGACGG AACATATGCG CGAAGTATTG GAACAGATCT CAGTGGTGAA GTCCTGCGTG
GCGGAGTTAC GCGAAACGCG TTGGCTCGAT GGTCAGTCGC GGCAGATGGT GCGGGTACGC
ATCGGCGCCG CTATCTCACA GGCGATGCCG GGCGCAACCA TGCTGGCGCT ACCGGTGATA
GGGCAAATCG TCCTGCTGTG CTATGGCGGC TGGTCGGTAA TGAATGGGCG CATCGATCTG
GGAACCTTCG TTGCGTTCGC GAGTTTTCTC GCTATGCTGA CCGGCCCTAC CCGCGTACTG
GCATCGTTTT TGGTTATCGC ACAGCGCACA CAGGCGTCGG TGGAGCGCGT CTTCGCGCTT
ATCGACACGC GTTCTCGCAT GGAAGACGGT ACTGAGTCGG TTGAAGGTCA GATTATCGGG
CTGGACGTGG AGAAGATGAG TTTCCACTAC GACAACGGTA ACCGTATCCT CAATGAGATC
TCGTTTTCCA TTCACGCCGG TGAAACCGTG GCAGTGGTTG GCGCCTCCGG CTCCGGGAAA
TCAACGTTGC TGATGTTGCT GGCGCGCTTT TACGATCCCA CCTCCGGCGG GGTGTGGCTC
AACACCACTA CGGGTCAACA GAATATTCGC GACCTGAAAC TGACGGCGCT TCGTCGTCGC
GTTGGCGTAG TGTTTGAAGA CGCGTTTCTG TTTGCCGGTA CGGTGGCGGA AAACATCGCC
TATGGGCACC CGCAAGCGAC TCAGGACGAC ATTCGACGCG CCGCCGATGC CGCAGGCGCC
AGCGGGTTCA TCAATGCGCT ACCGCAGGGG TTCAACACCC GACTGGCCGA ACGCGGAAGC
AACCTCTCCG GCGGCCAACG CCAGCGTATT GCGCTAGCCC GGGCACTGAT TACCGCGCCG
GAACTGCTGA TTCTCGATGA CACAACCTCG GCGGTCGATG CCGGTACTGA AGCGGAAATT
AACACGGCTC TTGGTCGTTA TGCCGATAAT GAGCATATGC TGCTGGTGAT TGCACGCCGC
CGTTCAACGC TGCAGTTAGC CGATCGGATC GTCGTGCTGG ATAAAGGCCG CGTCGTGGAT
ATCGGTACCC AGGCGGAGCT GGATGCAAGG TGTCCGACGT TTCGCTCGCT GATGAGCGGC
GAGGGTGATT TTCTCGCCCT TGCCCCGGCA GAACAACGGA CGCTATGGCC AACAACGCAG
GCGGCAAAAT CCGACGACGC GCATGAGCGC CAGACACCCG CCGGAAAAGG TTTTGTCGAC
CGGATGACGC GCGTTCCGGA ACGCGCCGTA CAGATGGCGC TGGCAGGCCA CGGGCGTCAA
GTCTCATCGC TGCTGACGCC AGTAGCCTGG ATGTTCGTCA TCGCCGCCCT GCTTATCGCG
CTTGATTCCG CCGCAGGCGT TGGCGTGCTG GTGCTTTTGC AGCGCGGTAT TGACTCAGGC
GTTGCCGCAG GGGATATGTC GACTATTGGC ATATGCGCTC TGCTCGCGCT GTGTCTGGTA
GCGATCGGTT GGTGCTGCTA TGCGCTGCAA ACGATCTTCG CCGCCCGCGC GGCAGAGTCG
GTACAGCATA CGGTACGCTT ACGCAGCTTC AGCCACCTGC TACGCCTGAG TCTTCCCTGG
CACGAGAAGC ACATCGACTC GCGTCTTACT CGCATGACCG TCGACGTTGA TTCACTCGCC
CGATTTCTGC AAAACGGTCT TGCCAGCGCG GCCACCAGCA TCGTGACGAT GGTCGCTATC
GCCGCGGCAA TGTTCTGGCT TGACCCCATT CTTGCGTTAA CGGCATTAAG CGCCGTACCT
GTAGTGATAC TGGCGACGTG GATTTACCGC CGTTTGAGCT CGCCTGCCTA CGCCCAGGCA
CGGCTGGAAA TTGGTAAGGT GAACAGTACG CTTCAGGAAA AGGTCTCCGG TATGCGGGTA
GTGCAGTCAC ACGGTCAACA GAAGCAGGAA GCCGCCAGGC TACGGGCGTT ATCAGACAAC
TTCCGCGCCA CCCGCGTGCG GGCGCAAAAA TACCTTGCTG TCTATTTTCC GTTCCTGACC
CTCTGCACCG AGGCCGCCTA TGCCGCCGTG CTTTTAATCG GGGCTACCCG GGTCGCCGGA
GGCGAAATGA CGCCCGGGAT ACTGGCGGCG TTCTTCCTGC TACTGGGACA ATTTTATGGC
CCGGTACAGC AGTTGTCAGG CATTGTTGAT TCCTGGCAGC AGGCGACCGC CAGCGGCAAA
CATATCAATG CGCTATTGGC GACTGAGGAA ACGGAGAATA TTGAACCGTC CTCCATAACG
CCTGGCACTG GCGGCGCGCT ACGTCTGGAG GCATTGACAT TCCGCTATCC CGAAAAAACG
CAACCTGTGC TTGATAATCT CTCGCTCACC ATTCCGCCAG GAACGGTGGT CGCGGTGGTC
GGACGTAGCG GCGCCGGCAA ATCGACGCTG ATCAAGCTGC TGGCCGGGCT CTACTCTCCC
GGCAGCGGGC AAATCCGTGT CGGTGAGCGC CTAATTGATG CCGCGTCGCT TAGTGATTAT
CGTCGCCAGA CGGGGCTGGT CACTCAGGAT GTCGCATTAT TTAGCGGCGA TATTGCCGAA
AATATCCGCT ATTCGCTGCC AGACAGCAGC GACACGGAGG TGGAGATCGC GGCGCGACAG
GCGGGACTCT TTGAAACTGT GCAACATCTG CCGCTGGGGT TCCGTACTCC GGTCAATAAC
GGCGGCACGG ATCTGTCCGC GGGCCAGCGT CAGTTGATTG CCCTCGCCCG CGCCCACCTG
GCGCAGGCGC ATATTCTGCT GCTCGACGAG GCGACAGCGC GTATCGACCG TAGCGCCGAG
GAGCGCTTAA TGACCTCGCT TACCAGGGTG ACGCATACCG AGAAACGCAT CGCGCTTATC
GTCGCGCACC GGCTGACCAC CGCTCGCCGT TGCGATGTTA TTGTCGTAAT CGATAAAGGA
TGTATCGCTG AATATGGCAG CCATGAGCAG TTGATAGCGA CTCATGGCCT GTATGCTCGT
CTGTGGCGGG ACAGCATCGG CCAGACACGC GATACGCAAG GAGAGGTCAT AGGATAG
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| Protein sequence | MPATHSPMPA RAWIVRLARV CWERKTLSII VIVASVSTIL LAALTPLITR QAVNDAIAGD
TTHLPLLACG LLLIALFDFI GNYVRRGYAG ELSLWVQHTL RSRAFDSIQK LDGAGQDALR
TGQVISRTNS DLQQVHTLLQ MCPVPLAVLT YYVAGIAVML WMSPSMTLIV ICVLAALAIT
ALRARRRVFA QTGLASDRLA HMTEHMREVL EQISVVKSCV AELRETRWLD GQSRQMVRVR
IGAAISQAMP GATMLALPVI GQIVLLCYGG WSVMNGRIDL GTFVAFASFL AMLTGPTRVL
ASFLVIAQRT QASVERVFAL IDTRSRMEDG TESVEGQIIG LDVEKMSFHY DNGNRILNEI
SFSIHAGETV AVVGASGSGK STLLMLLARF YDPTSGGVWL NTTTGQQNIR DLKLTALRRR
VGVVFEDAFL FAGTVAENIA YGHPQATQDD IRRAADAAGA SGFINALPQG FNTRLAERGS
NLSGGQRQRI ALARALITAP ELLILDDTTS AVDAGTEAEI NTALGRYADN EHMLLVIARR
RSTLQLADRI VVLDKGRVVD IGTQAELDAR CPTFRSLMSG EGDFLALAPA EQRTLWPTTQ
AAKSDDAHER QTPAGKGFVD RMTRVPERAV QMALAGHGRQ VSSLLTPVAW MFVIAALLIA
LDSAAGVGVL VLLQRGIDSG VAAGDMSTIG ICALLALCLV AIGWCCYALQ TIFAARAAES
VQHTVRLRSF SHLLRLSLPW HEKHIDSRLT RMTVDVDSLA RFLQNGLASA ATSIVTMVAI
AAAMFWLDPI LALTALSAVP VVILATWIYR RLSSPAYAQA RLEIGKVNST LQEKVSGMRV
VQSHGQQKQE AARLRALSDN FRATRVRAQK YLAVYFPFLT LCTEAAYAAV LLIGATRVAG
GEMTPGILAA FFLLLGQFYG PVQQLSGIVD SWQQATASGK HINALLATEE TENIEPSSIT
PGTGGALRLE ALTFRYPEKT QPVLDNLSLT IPPGTVVAVV GRSGAGKSTL IKLLAGLYSP
GSGQIRVGER LIDAASLSDY RRQTGLVTQD VALFSGDIAE NIRYSLPDSS DTEVEIAARQ
AGLFETVQHL PLGFRTPVNN GGTDLSAGQR QLIALARAHL AQAHILLLDE ATARIDRSAE
ERLMTSLTRV THTEKRIALI VAHRLTTARR CDVIVVIDKG CIAEYGSHEQ LIATHGLYAR
LWRDSIGQTR DTQGEVIG
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