| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3057 |
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| Symbol | |
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| ID | 6873184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2948481 |
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| End bp | 2950877 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642786087 |
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| Product | bacteriophage replication gene A |
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| Protein accession | YP_002216733 |
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| Protein GI | 198245528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.848842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.491579 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCATG CTGATATGAA CAACTGCAGC GGCTTTAACG AGGCCGCCGC AGCATTCTCA
TGGAACAGCC CGAAAAAGGC TATTAACCCT TATCTGGACC CGGCGGAAGT TGCGCCGGTT
TCTGCGCTTT CAAACCTGAT CACTCTGTAC GCTGCCGATA ACGAGCAGGA ACAACTGCGC
CGCGAGGCAC TGAGTGATCA GGTCTGGGAG CGTTATTTCT TTAATGAATC CCGTGATCCT
GTCCAGCGCG AAATGGAGCA GGATAAGCTC ATTAGCCGGG CAAAGCTGGC GCATGAGCAG
CAGCGTTTTA ATCCGGACAT GGTCATACTG GCGGACGTTA ACGCCCAGCC TTCCCATATC
AGCAAGCCGC TGATGCAACG TATTGAATAC TTCAGCAGCC TGGGCAGGCC AAAGGCTTAT
TCCCGCTATT TGCGTGAGAC GATTAAGCCA TGTCTGGAAC GACTGGAGCA TGTACGCGAC
AGTCAGCTAT CCACTTCTTT TCGCTTTATG GCAAGCCATG AAGGGCTGGA CGGCCTGCTG
ATCTTGCCTG AAATGAGTCA GGATCAGGTG AAACGCCTGT CTACTCTTGT CGCTGCGCAT
ATGAGTATGT GTCTTGATGC CGCTTGTGGT GATTTGTATG CCACCGATGA TGTTAAGCCA
GAAGAAATCC GCAAGACATG GGAAAAGGTG GCAGCAGAAA CCCTGCGACT GGATGTCATA
CCGCCTGCGT TTGAGCAACT CCGCCGGAAA AGAAACCGCC GTAAACCCGT GCCCTATGAA
CTCATTCCGG GTTCGCTGGC GCGTATGTTG TGCGCCGATT GGTGGTACCG GAAATTATGG
AAGATGCGTT GCGAATGGCG GGAAGAGCAG TTGCGTGCTG TTTGCCTGGT CAGCAAAAAA
GCATCTCCCT ATGTCAGCTA TGAAGTCGTG ATGCATAAAC GTGAGCAGCG CCGTAAGTCG
CTGGAGTTTT TCCGTTCTCA TGAACTGGTG AACGAAGACG GCGACACGCT GGACATGGAG
GATGTGGTAA ACGCCAGCAG CAGCAACCCT GCGCATCGCC GCAATGAGAT GATGGCCTGT
GTTAAAGGTC TGGAGCTTAT CGCGGAAATG CGCGGTGACT GCGCCGTTTT CTACACCATC
ACCTGTCCGT CACGTTTCCA TTCCACGCTA AATAACGGCA GGCCCAACCC GACCTGGACA
AATGCGACGG TAAGACAAAG CAGTGATTAT CTGGTCGGCA TTTTTGCTGC ATTTCGTAAG
GCGATGCTCA AAGCCGGATT GCGCTGGTAT GGCGTGCGGG TGGCTGAGCC GCATCATGAC
GGCACAGTTC ACTGGCACCT GTTGTGTTTC ATGCGCAAAA AAGACCGCCG CGCCATTACT
GCATTGTTGC GTAAGTTTGC TATCCGTGAA GACCGCGAGG AGCTGGGTAA TAACACGGGG
CCACGCTTTA AGTCTGAGCT GATAAACCCG CGCAAAGGAA CGCCGACTAG CTACATCGCG
AAATACATCA GTAAGAACAT TGACGGGCGT GGTCTGGCTG GCGGGATCAG CAAGGAAACG
GGTAAATCTC TGCGTGATAA CGCTGAATAC GTTAATGCCT GGGCGTCTCT GCATCGTGTT
CAGCAATTCC GCTTCTTTGG CATTCCGGGG CGTCAGGCTT ACCGTGAACT GCGATTGCTG
GCTGGTCAGG CGGCAAGGCA ACAGGGTGAC AAAAAAGCAG GTGCGCCGGT ACTGGATAAC
CCGCGCCTTG ATGCCATTCT GGCTGCAGCT GATGCTGGTT GTTTTGCCAC CTACATCATG
AAGCAGGGCG GCGTACTGGT TCCCCGTAAA TATCACCTCA TCAGAACCGC TTATGAAATC
AACGAAGAGC CGACCGCCTA TGGCGATCAC GGCATTCGTA TTTATGGCAT CTGGTCACCC
ATTGCAGAGG GTAAGATCTG CACTCATGCA GTGAAGTGGA AAATGGTTCG TAAGGCCGTT
GACGTTCAGG AGGCGGCAGC CGACCAGGGC GCTTGCGCCC CTTGGACTCG TGGCAATAAC
TGTCCCCCTG TTGAAAATAC GAACAAATCA GGGGGGGATC TGCCCGATAT TAAAACCATG
AATGAGAAGG AACTGCAGGA TTATCTCCAC AATATGGGCC AGAAGGAACG GCGGGAACTT
ACCGCCAGGT TGAGACTGGT AAAACCGAAG CGGAAAACAG TATACAAACA GAATATTTCG
GAGCAGCAGC GCCTGCAGCT TAAGGCAGAA CTGACTGCCA GAGGGTTTGA AGGTAGTGCA
TCGGAGATTG ATTTGCTTCT GCGTGGCGGC AGTATTCCAT CCGGGGCTGG GTTGCGTATT
TTTTACCGTA ACCAGCGGTT GCAGGAAGAT GATAGATGGC GGCAATGGTA CGGCTGA
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| Protein sequence | MSHADMNNCS GFNEAAAAFS WNSPKKAINP YLDPAEVAPV SALSNLITLY AADNEQEQLR
REALSDQVWE RYFFNESRDP VQREMEQDKL ISRAKLAHEQ QRFNPDMVIL ADVNAQPSHI
SKPLMQRIEY FSSLGRPKAY SRYLRETIKP CLERLEHVRD SQLSTSFRFM ASHEGLDGLL
ILPEMSQDQV KRLSTLVAAH MSMCLDAACG DLYATDDVKP EEIRKTWEKV AAETLRLDVI
PPAFEQLRRK RNRRKPVPYE LIPGSLARML CADWWYRKLW KMRCEWREEQ LRAVCLVSKK
ASPYVSYEVV MHKREQRRKS LEFFRSHELV NEDGDTLDME DVVNASSSNP AHRRNEMMAC
VKGLELIAEM RGDCAVFYTI TCPSRFHSTL NNGRPNPTWT NATVRQSSDY LVGIFAAFRK
AMLKAGLRWY GVRVAEPHHD GTVHWHLLCF MRKKDRRAIT ALLRKFAIRE DREELGNNTG
PRFKSELINP RKGTPTSYIA KYISKNIDGR GLAGGISKET GKSLRDNAEY VNAWASLHRV
QQFRFFGIPG RQAYRELRLL AGQAARQQGD KKAGAPVLDN PRLDAILAAA DAGCFATYIM
KQGGVLVPRK YHLIRTAYEI NEEPTAYGDH GIRIYGIWSP IAEGKICTHA VKWKMVRKAV
DVQEAAADQG ACAPWTRGNN CPPVENTNKS GGDLPDIKTM NEKELQDYLH NMGQKERREL
TARLRLVKPK RKTVYKQNIS EQQRLQLKAE LTARGFEGSA SEIDLLLRGG SIPSGAGLRI
FYRNQRLQED DRWRQWYG
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