Gene SeD_A3043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3043 
Symbol 
ID6875549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2937441 
End bp2937953 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content58% 
IMG OID642786073 
Productphage lysozyme 
Protein accessionYP_002216719 
Protein GI198241915 
COG category[R] General function prediction only 
COG ID[COG3772] Phage-related lysozyme (muraminidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.00146006 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCAT CAATCGTTAA ACGCTGCCTT GTCGGGGCCG TGCTGGCTAT TGCTGCCACG 
CTGCCGGGGT TTCAGCAGCT TCACACCTCC GTGGAGGGGC TGAAACTGAT TGCCGATTAC 
GAAGGCTGTC GTCTGCAGCC GTATCAGTGC AGCGCGGGTG TCTGGACCGA CGGCATTGGT 
AATACATCGG GCGTCATTCC CGGCAAAACA ATCACGGAAC GACAGGCAGC AGAAGGGCTG 
ATCTCCAACG TGCTGCGTGT GGAGCGGGCA CTGGAAAGGT GTGTGAAGCA ACAGCCACCA 
CAGAAGGTGT ATGACGCTAC GGTGTCGTTT GCCTTCAACG TGGGGACGGG CAATGCCTGC 
AGCTCCACGC TGGTGAAATT GCTCAATCAG CGGCGCTGGG CGGATGCGTG CCGACAGTTG 
CCGCGCTGGG TTTATGTAAA AGGTGTGTTT AATCAGGGGC TGGATAACCG CCGTGCGCGG 
GAGATGGCCT GGTGCTTACA GGGAGCAAAC TGA
 
Protein sequence
MNPSIVKRCL VGAVLAIAAT LPGFQQLHTS VEGLKLIADY EGCRLQPYQC SAGVWTDGIG 
NTSGVIPGKT ITERQAAEGL ISNVLRVERA LERCVKQQPP QKVYDATVSF AFNVGTGNAC 
SSTLVKLLNQ RRWADACRQL PRWVYVKGVF NQGLDNRRAR EMAWCLQGAN