Gene SeD_A3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3036 
Symbol 
ID6871305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2933748 
End bp2934107 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content59% 
IMG OID642786066 
Productbaseplate assembly protein W 
Protein accessionYP_002216712 
Protein GI198242870 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.000323923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCTGT ATCTCGGCAT GAGTCAGAGC AATGGAAAAG CGATTACGGA TACCGACCAT 
CTGCGCCAGT CGGTGCGGGA TATTCTGCTG ACGCCGCAGG GCAGCCGCAT TGCCCGCCGG 
GAATACGGTT CCCTGCTGTC GACCCTGATT GACCGGCCGC AGAACCCGGC GCTGAGACTG 
CAGATCATGT CTGCGGTCTA CGTGGCCCTG AGTCGCTGGG AGCCACGACT GACGCTGGAT 
TCCATCACCA TCAGCAGCAA TTTTGATGGC TCCATGGTGG TTGAGCTTAC CGGACAGCGC 
AACAACGGCG CGCCGGTTTC CCTTTCCGTA TCAACAGGAG CAGACAATGG CAGTCATTGA
 
Protein sequence
MTLYLGMSQS NGKAITDTDH LRQSVRDILL TPQGSRIARR EYGSLLSTLI DRPQNPALRL 
QIMSAVYVAL SRWEPRLTLD SITISSNFDG SMVVELTGQR NNGAPVSLSV STGADNGSH