Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3034 |
Symbol | |
ID | 6872429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2932255 |
End bp | 2932860 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642786064 |
Product | phage tail protein I |
Protein accession | YP_002216710 |
Protein GI | 198243193 |
COG category | [R] General function prediction only |
COG ID | [COG4385] Bacteriophage P2-related tail formation protein |
TIGRFAM ID | [TIGR01634] phage tail protein, P2 protein I family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.8346 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.00021132 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAGTC TGTTGCCGCC GGGTTCGTCG CCGCTTGAGC GCCGACTGGC GCAGACCTGC AGCGGGATTT CCGATCTGCA GGTATCGCTG CGTGATTTGT GGAACCCGGC AACCTGCCCG ATCAGATTCC TGCCTTATCT GGCCTGGGCG TTTTCTGTTG ACCGCTGGGA TGAGAGCTGG ACAGAAAGCG TCAAGCGCCG CGTTGTGCAG GACGCTTTTT ATATCCATCA GCACAAGGGG ACAACCCGCG CCGTGCGGCG CGTGGTGGAG CCGTTCGGCT TCCTGATCCG CATCATTGAG TGGTGGCAGA CCGGCGAAAC GCCGGGAACG TTCCGTCTGG ATATTGGCGT ACAGGATCAT GGTATCACCG AAGACACCTA TCTGGAGCTT GAGCGCCTGA TAAGCGATGC CAAACCATGC AGCCGTCATC TGGTTGGTAT GTCCATCAAC CTGCAGACAG GTGGCCCGTA TTTTGTGGGG GCAGCCACCT ACACCGGCGA AGAAATCACG ATCTACCCGT ATATCAACGA AACCATTATT TCCGGCGGCA CCGCTTATGA GGGCGGGGCG GTCCATGTTA TTGACACAAT GAGAGTGAAT CCATGA
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Protein sequence | MNSLLPPGSS PLERRLAQTC SGISDLQVSL RDLWNPATCP IRFLPYLAWA FSVDRWDESW TESVKRRVVQ DAFYIHQHKG TTRAVRRVVE PFGFLIRIIE WWQTGETPGT FRLDIGVQDH GITEDTYLEL ERLISDAKPC SRHLVGMSIN LQTGGPYFVG AATYTGEEIT IYPYINETII SGGTAYEGGA VHVIDTMRVN P
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