Gene SeD_A3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A3007 
Symbol 
ID6874521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2898473 
End bp2899714 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content53% 
IMG OID642786042 
Producthypothetical protein 
Protein accessionYP_002216688 
Protein GI198244356 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.103767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTCA TCTCGGCCTA TTTTTCCGGT TCCGAAACTG GAATGATGAC GCTAAACCGT 
TACCGTTTAC GCCATATGGC GAAGCAAGGT AATCGCTCGG CAAAACGGGT AGAAAAATTA
CTGCGTAAAC CCGGCCGACT GATAAGCCTG GTGCTGATCG GCAATAACCT GGTCAACATT
CTTGCCTCGG CGCTCGGCAC GATTGTGGGT ATGCGGCTTT ACGGCGACGC TGGCGTGGCT
ATCGCCACCG GGGTACTGAC GTTTGTCGTG TTAGTTTTTG CCGAAGTCCT GCCCAAAACT
ATCGCCGCGC TCTATCCGGA AAAAGTGGCC TATCCCAGCA GCTTCCTGCT GGCGCCGTTA
CAGATACTGA TGATGCCGCT GGTGTGGTTA CTTAACACCA TCACCCGCCT GCTGATGCGT
CTGATGGGAA TTAAAACGGA CATCGTGGTT AGCGGGTCGT TAAGCAAAGA GGAATTACGC
ACTATCGTGC ATGAATCCCG TTCGCAAATC TCTCGCCGCA ATCAGGATAT GCTGCTGTCG
GTTCTCGATC TGGAAAAGGT CAGCGTGGAT GACATCATGG TGCCGCGTAA TGAAATTATC
GGGATCGATA TCAATGACGA CTGGAAGTCT ATCGAGCGGC AGCTCACCCA CTCGCCACAC
GGACGCATTG TGCTCTATCG CGATTCGCTG GATGACGCCA TCAGTATGCT GCGCGTGCGT
GAAGCCTGGC GGTTAATGGC CGAGAAAAAA GAGTTCACCA AAGAGATGAT GCTGCGCGCC
GCCGATGAAA TCTATTACGT CCCGGAAGGT ACGCCGCTCA GTACACAACT GATTAAATTT
CAGCGCAATA AAAAGAAAGT CGGACTGGTC GTCAACGAAT ATGGCGATAT CCAGGGGCTG
GTCACCGTGG AAGATATTCT CGAGGAGATC GTTGGCGACT TCACCACATC GATGTCGCCG
ACCCTGGCGG AAGAGGTCAC GCCGCAAAAC GACGGTTCGG TCATTATTGA CGGTACCGCC
AACGTCCGGG AAATCAATAA AGCGTTTAAC TGGCACCTGC CGGAAGACGA CGCGCGCACC
GTCAACGGGG TGATTCTGGA GGCTCTGGAG GAAATTCCGG TTGCTGGCAC GCGCGTGCGC
ATTGAGCAGT ACGATATCGA TATTCTCGAT GTACAGGAAA ATATGATTAA GCAGGTAAAG
GTTGTACCGG TAAAGCCGCT GCGCGAGAGT GTGGCGGAGT AA
 
Protein sequence
MVVISAYFSG SETGMMTLNR YRLRHMAKQG NRSAKRVEKL LRKPGRLISL VLIGNNLVNI 
LASALGTIVG MRLYGDAGVA IATGVLTFVV LVFAEVLPKT IAALYPEKVA YPSSFLLAPL
QILMMPLVWL LNTITRLLMR LMGIKTDIVV SGSLSKEELR TIVHESRSQI SRRNQDMLLS
VLDLEKVSVD DIMVPRNEII GIDINDDWKS IERQLTHSPH GRIVLYRDSL DDAISMLRVR
EAWRLMAEKK EFTKEMMLRA ADEIYYVPEG TPLSTQLIKF QRNKKKVGLV VNEYGDIQGL
VTVEDILEEI VGDFTTSMSP TLAEEVTPQN DGSVIIDGTA NVREINKAFN WHLPEDDART
VNGVILEALE EIPVAGTRVR IEQYDIDILD VQENMIKQVK VVPVKPLRES VAE