Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3007 |
Symbol | |
ID | 6874521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2898473 |
End bp | 2899714 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642786042 |
Product | hypothetical protein |
Protein accession | YP_002216688 |
Protein GI | 198244356 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.103767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGTCA TCTCGGCCTA TTTTTCCGGT TCCGAAACTG GAATGATGAC GCTAAACCGT TACCGTTTAC GCCATATGGC GAAGCAAGGT AATCGCTCGG CAAAACGGGT AGAAAAATTA CTGCGTAAAC CCGGCCGACT GATAAGCCTG GTGCTGATCG GCAATAACCT GGTCAACATT CTTGCCTCGG CGCTCGGCAC GATTGTGGGT ATGCGGCTTT ACGGCGACGC TGGCGTGGCT ATCGCCACCG GGGTACTGAC GTTTGTCGTG TTAGTTTTTG CCGAAGTCCT GCCCAAAACT ATCGCCGCGC TCTATCCGGA AAAAGTGGCC TATCCCAGCA GCTTCCTGCT GGCGCCGTTA CAGATACTGA TGATGCCGCT GGTGTGGTTA CTTAACACCA TCACCCGCCT GCTGATGCGT CTGATGGGAA TTAAAACGGA CATCGTGGTT AGCGGGTCGT TAAGCAAAGA GGAATTACGC ACTATCGTGC ATGAATCCCG TTCGCAAATC TCTCGCCGCA ATCAGGATAT GCTGCTGTCG GTTCTCGATC TGGAAAAGGT CAGCGTGGAT GACATCATGG TGCCGCGTAA TGAAATTATC GGGATCGATA TCAATGACGA CTGGAAGTCT ATCGAGCGGC AGCTCACCCA CTCGCCACAC GGACGCATTG TGCTCTATCG CGATTCGCTG GATGACGCCA TCAGTATGCT GCGCGTGCGT GAAGCCTGGC GGTTAATGGC CGAGAAAAAA GAGTTCACCA AAGAGATGAT GCTGCGCGCC GCCGATGAAA TCTATTACGT CCCGGAAGGT ACGCCGCTCA GTACACAACT GATTAAATTT CAGCGCAATA AAAAGAAAGT CGGACTGGTC GTCAACGAAT ATGGCGATAT CCAGGGGCTG GTCACCGTGG AAGATATTCT CGAGGAGATC GTTGGCGACT TCACCACATC GATGTCGCCG ACCCTGGCGG AAGAGGTCAC GCCGCAAAAC GACGGTTCGG TCATTATTGA CGGTACCGCC AACGTCCGGG AAATCAATAA AGCGTTTAAC TGGCACCTGC CGGAAGACGA CGCGCGCACC GTCAACGGGG TGATTCTGGA GGCTCTGGAG GAAATTCCGG TTGCTGGCAC GCGCGTGCGC ATTGAGCAGT ACGATATCGA TATTCTCGAT GTACAGGAAA ATATGATTAA GCAGGTAAAG GTTGTACCGG TAAAGCCGCT GCGCGAGAGT GTGGCGGAGT AA
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Protein sequence | MVVISAYFSG SETGMMTLNR YRLRHMAKQG NRSAKRVEKL LRKPGRLISL VLIGNNLVNI LASALGTIVG MRLYGDAGVA IATGVLTFVV LVFAEVLPKT IAALYPEKVA YPSSFLLAPL QILMMPLVWL LNTITRLLMR LMGIKTDIVV SGSLSKEELR TIVHESRSQI SRRNQDMLLS VLDLEKVSVD DIMVPRNEII GIDINDDWKS IERQLTHSPH GRIVLYRDSL DDAISMLRVR EAWRLMAEKK EFTKEMMLRA ADEIYYVPEG TPLSTQLIKF QRNKKKVGLV VNEYGDIQGL VTVEDILEEI VGDFTTSMSP TLAEEVTPQN DGSVIIDGTA NVREINKAFN WHLPEDDART VNGVILEALE EIPVAGTRVR IEQYDIDILD VQENMIKQVK VVPVKPLRES VAE
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