Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3005 |
Symbol | ffh |
ID | 6873217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2896090 |
End bp | 2897451 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642786041 |
Product | signal recognition particle protein |
Protein accession | YP_002216687 |
Protein GI | 198243111 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.242955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATA ATTTAACCGA TCGTTTGTCG CGCACGCTGC GCAATATCAG TGGCCGTGGG CGCCTTACTG AAGACAACGT TAAAGAGACG CTGCGCGAAG TGCGCATGGC GCTGCTGGAG GCTGACGTTG CGCTGCCGGT AGTGCGTGAG TTCATCAATC GCGTAAAAGA GAAAGCGGTT GGTCATGAAG TTAACAAGAG CCTGACCCCA GGGCAGGAGT TCGTCAAGAT TGTCCGTAGC GAACTGGTTG CGGCGATGGG CGAAGAGAAC CAGACGCTGA ATTTAGCTGC GCAGCCGCCA GCCGTAGTAT TGATGGCGGG TCTGCAGGGG GCGGGTAAAA CCACCAGCGT CGGTAAGTTG GGTAAATTCT TGCGCGAGAA GCACAAGAAG AAAGTGCTGG TCGTCTCTGC CGACGTCTAT CGCCCGGCGG CGATCAAACA GCTCGAAACG CTGGCTGAAC AGGTTGGCGT GGATTTCTTC CCGTCTGATG TCGGCCAGAA ACCGGTTGAT ATCGTCAACG CCGCGCTGAA AGAAGCGAAG CTCAAATTCT ACGACGTGCT GCTGGTGGAT ACCGCCGGTC GTCTGCACGT TGACGAAGCG ATGATGGACG AAATCAAACA GGTCCACGCT TCTATCAAGC CAGTAGAAAC GCTGTTTGTC GTCGATGCGA TGACCGGTCA GGATGCGGCG AATACCGCAA AAGCCTTTAA CGAAGCGCTG CCGTTAACCG GCGTGGTGCT GACCAAAGTT GATGGTGATG CTCGTGGCGG TGCGGCGCTC TCTATTCGTC ATATCACCGG CAAGCCGATT AAATTCCTCG GTGTCGGCGA GAAAACCGAC GCGCTGGAAC CGTTCCACCC GGATCGTATC GCCTCGCGTA TTCTCGGTAT GGGCGACGTA CTGTCTCTTA TCGAAGATAT CGAAAGCAAA GTTGACCGCG CACAGGCTGA AAAGCTGGCG ACTAAACTGA AGAAAGGCGA CGGTTTCGAC CTGAACGACT TCCTGGAACA GCTCAAACAG ATGAAAAACA TGGGCGGTAT GGCCAGTCTG ATGGGCAAAT TACCGGGCAT GGGGCAGATT CCGGACAACG TTAAATCGCA GATGGATGAC AAGGTGCTGG TGCGTATGGA AGCGATCATC AATTCGATGA CGCTGAAAGA GCGCGCGAAG CCGGAAATCA TCAAAGGTTC CCGCAAGCGT CGTATCGCGC AGGGCTGTGG GATGCAGGTG CAGGACGTTA ACCGCCTTCT GAAACAGTTC GACGACATGC AGCGCATGAT GAAGAAGATG AAGAAGGGCG GGATGGCGAA GATGATGCGC AGTATGAAGG GGATGATGCC GCCAGGCTTC CCGGGTCGCT AA
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Protein sequence | MFDNLTDRLS RTLRNISGRG RLTEDNVKET LREVRMALLE ADVALPVVRE FINRVKEKAV GHEVNKSLTP GQEFVKIVRS ELVAAMGEEN QTLNLAAQPP AVVLMAGLQG AGKTTSVGKL GKFLREKHKK KVLVVSADVY RPAAIKQLET LAEQVGVDFF PSDVGQKPVD IVNAALKEAK LKFYDVLLVD TAGRLHVDEA MMDEIKQVHA SIKPVETLFV VDAMTGQDAA NTAKAFNEAL PLTGVVLTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV LSLIEDIESK VDRAQAEKLA TKLKKGDGFD LNDFLEQLKQ MKNMGGMASL MGKLPGMGQI PDNVKSQMDD KVLVRMEAII NSMTLKERAK PEIIKGSRKR RIAQGCGMQV QDVNRLLKQF DDMQRMMKKM KKGGMAKMMR SMKGMMPPGF PGR
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