| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3003 |
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| Symbol | rimM |
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| ID | 6872133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2895022 |
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| End bp | 2895573 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642786039 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_002216685 |
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| Protein GI | 198245720 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.24752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAGCA AGCAACTCGC CGCACAAGTA CCCGCTGAAC CGGTTGTACT GGGGAAAATG
GGTTCTTCAT ACGGTATCCG TGGTTGGCTC AGAGTGTTTT CCTCCACTGA AGACGCCGAA
AGCATTTTTG ACTATCAGCC CTGGTTTATC CAGAAGGCGG GTCAGTGGCA GCAGGTACAG
CTGGAAAGCT GGAAGCACCA CAATCAGGAT CTGATCATCA AGCTGAAAGG CGTTGACGAT
CGAGATGCCG CGAATCTTCT GACCAATTGC GAAATTGTCG TGGATTCCTC GCAACTTCCT
GCGCTTGAGG AGGGAGACTA TTACTGGAAA GACCTGATGG GTTGCCAGGT AGTCACCGCT
GAAGGCTACG ATCTCGGTAA AGTTATCGAC ATGATGGAAA CCGGGTCGAA TGACGTTCTC
GTCATTAAGG CGAACCTGAA AGATGCATTT GGTATCAAGG AACGACTAGT ACCGTTCCTC
GATGGGCAGG TTATCAAGAA AGTCGATCTC GCTACTCGTA CTATCGAAGT AGACTGGGAT
CCTGGTTTTT AA
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| Protein sequence | MMSKQLAAQV PAEPVVLGKM GSSYGIRGWL RVFSSTEDAE SIFDYQPWFI QKAGQWQQVQ
LESWKHHNQD LIIKLKGVDD RDAANLLTNC EIVVDSSQLP ALEEGDYYWK DLMGCQVVTA
EGYDLGKVID MMETGSNDVL VIKANLKDAF GIKERLVPFL DGQVIKKVDL ATRTIEVDWD
PGF
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