Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A3002 |
Symbol | trmD |
ID | 6872541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2894210 |
End bp | 2894977 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786038 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_002216684 |
Protein GI | 198242857 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 74 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTATTG GCATCGTTAG CCTGTTTCCT GAAATGTTCC GCGCAATTAC CGATTACGGG GTAACTGGCC GGGCAGTAAA AAAAGGCCTG CTGAACATCC AAAGCTGGAG TCCTCGCGAC TTCGCGCATG ACCGGCACCG TACCGTGGAC GACCGTCCTT ACGGCGGCGG ACCGGGGATG TTAATGATGG TGCAACCCTT GCGGGACGCC ATTCACGCAG CAAAAGCCGC GGCAGGTGAA GGCGCTAAAG TGATTTATCT GTCGCCTCAG GGACGCAAGC TTGATCAAGC GGGCGTTAGC GAGCTGGCCA CGAATCAGAA GCTTATTCTG GTGTGTGGTC GCTACGAAGG CGTAGATGAG CGCGTAATTC AGACCGAAAT TGACGAAGAA TGGTCAATTG GCGATTACGT TCTCAGCGGT GGCGAACTAC CGGCAATGAC GCTGATTGAC TCCGTCGCCC GGTTTATACC GGGGGTTCTG GGGCATGAGG CATCAGCAAT CGAAGATTCG TTTGCTGATG GGTTGCTGGA TTGTCCGCAC TATACGCGCC CTGAAGTGTT AGAGGGGATG GAAGTACCGC CAGTATTGCT GTCGGGAAAC CATGCCGAGA TACGTCGCTG GCGCTTGAAA CAGTCGCTGG GCCGAACCTG GCTTAGAAGA CCTGAACTTC TGGAAAACCT GGCTCTGACT GAAGAGCAAG CAAGGTTGCT GGCGGAGTTC AAAACAGAAC ACGCACAACA GCAGCATAAA CATGATGGGA TGGCATAG
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Protein sequence | MFIGIVSLFP EMFRAITDYG VTGRAVKKGL LNIQSWSPRD FAHDRHRTVD DRPYGGGPGM LMMVQPLRDA IHAAKAAAGE GAKVIYLSPQ GRKLDQAGVS ELATNQKLIL VCGRYEGVDE RVIQTEIDEE WSIGDYVLSG GELPAMTLID SVARFIPGVL GHEASAIEDS FADGLLDCPH YTRPEVLEGM EVPPVLLSGN HAEIRRWRLK QSLGRTWLRR PELLENLALT EEQARLLAEF KTEHAQQQHK HDGMA
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