| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3000 |
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| Symbol | |
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| ID | 6873673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | + |
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| Start bp | 2892525 |
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| End bp | 2893664 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642786036 |
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| Product | hypothetical protein |
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| Protein accession | YP_002216682 |
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| Protein GI | 198243597 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGA TCTGGCTATT AATTTGCGTT GCGTCTGTCC TTACGCTCAA ACAGTATGCG
CAAAAAAATC TCGATTTGAC CGCCGCCACA ATGGCCCATA GCCTTGAAGC GGCACTGGTA
TTTTCCGATA ACGCGGCCGC AGCGGAAACG CTCGCCACAC TGGGACGCCA GGGACAATTT
TCAGCGGCGG AGGTCCGCGA TAAAAATGGC CGTACTATCG CCTCATGGCG CTATGATTCG
CGAGCCGCAG ACGATAAGCT CATCGGCTTA ATTAGCCACT GGCTTTTTCC ATTGCCGGTA
TCACAACCCG TCTGGCACAA CGGCAGGGCC ATCGGCGAAG TACGGCTTGT CGCCCGCGAC
AGCCTTATTG GTCATTTTAT CTGGCTATCG CTGGCAGTGC TGACAGGATG TATTCTGCTG
GCATCCGGCA TTGCCCTGCT GCTCACGCGT TATTTGCACA ATGGCGTTGT GGATGCGCTG
CAAAATATTA CTGAAGTTGT ACACGACGTT CGCACTAACC GAAATTTTTC ACGCCGGGTA
CCTGATGAGC GTATTGCGGA ATTTCACCTG TTTGCGCAGG ATTTCAATAG CCTTCTGGAT
GAGATGGAAG AATGGCAGCT ACGGCTTCAG GCTAAAAATG CCCAGTTACT ACGTACCGCG
TTGCACGATC CGCTGACGGG GCTTGCCAAT CGCGCGGCAT TTCGCAGCTG TATTAACGCG
CTGATGAAGG ACAATTCCGC TCGTAGCTGT TCGGCATTGT TATTTCTGGA TGGCGATAAC
TTTAAATATA TTAATGATAC CTGGGGACAT GCGGCAGGCG ACCGCGTACT TATAGAGGTT
GCCAAAAGAT TAGCGGAATT CGGTGGTAGC CGTTATCAGA CTTACCGACT CGGCGGCGAT
GAATTTGCGA TGGTGCTTTA CGATGTACAT TCGGAATATG AAGTACAACG TATTTGCGCA
GCGCTATCCC AGGCGTTTAA TCGACCTTTT GAACTGCATA ACGGCCAGCG AATAACGATG
ACCCTGAGTA TTGGCTTTGC GCTGACATGG GAACATGCCA CTGCCGAAAA ACTACAAGAA
CTGGCCGATC GAAATATGTA TCAGGCTAAA CACCGGCGTG CGGAACGCTC GCTAAACTAA
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| Protein sequence | MTLIWLLICV ASVLTLKQYA QKNLDLTAAT MAHSLEAALV FSDNAAAAET LATLGRQGQF
SAAEVRDKNG RTIASWRYDS RAADDKLIGL ISHWLFPLPV SQPVWHNGRA IGEVRLVARD
SLIGHFIWLS LAVLTGCILL ASGIALLLTR YLHNGVVDAL QNITEVVHDV RTNRNFSRRV
PDERIAEFHL FAQDFNSLLD EMEEWQLRLQ AKNAQLLRTA LHDPLTGLAN RAAFRSCINA
LMKDNSARSC SALLFLDGDN FKYINDTWGH AAGDRVLIEV AKRLAEFGGS RYQTYRLGGD
EFAMVLYDVH SEYEVQRICA ALSQAFNRPF ELHNGQRITM TLSIGFALTW EHATAEKLQE
LADRNMYQAK HRRAERSLN
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