Gene SeD_A2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2995 
Symbol 
ID6871390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2888326 
End bp2889234 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content54% 
IMG OID642786031 
ProductSMP-30/Gluconolaconase/LRE domain-containing protein 
Protein accessionYP_002216677 
Protein GI198242725 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGC CGCACGTTTT ATTTGATTAT GCCGGACATT TACCAGAATG CCCCACATGG 
AGCGAGGATG AAAGCGCGCT GTATTGGACC GATATCCTGG AACAGGAGAT CCATCGTTAC
CATCCGGCGA GCGGGACGCA TAGCGTGCTG GCGTTTCCGG AAGAGGTGGG CTGTTTTGCC
TTGCGTGAGC AGGGCGGATT TATTGTGGCC ATGCGTCATG CTATCTGGCT GGCCGATAAA
AATGGATTAT TGCAGCGTAA GGTTTGCGAC AATCCCTCTA ATACGAAACT GGCGCGTTTC
AACGATGGCG GCACTGATGG CGATGGACGT TTTTATGCCG GAACGTTCTG GGCGCCAGGT
GACTATAATG GCGCGTTGCT GATGCGGATC GATCATGACC TGACGGCAAA AGTGATCCAG
TGCGATATCC AGGGACACAA CGGCCTGGCG TTCAGCCCGG ATAACCAGTG GATGTATACC
TCCGATACGC CGAATGGCGT GATATACCGC ACGTTACTTG ATAAGCATGG CGATCCGGGC
AAGCGTGAAC TTTTTCGCCA TTTTGGCGAA GGAGAAGGAC TTCCCGACGG CGCGGCGATG
GATAGCGAAG GGTGCTACTG GAGCGCGATG TTTGACGGCT GGCGCGTGGC GCGTTTCTCA
CCGCAAGGAG AGCAGCTGGA AGAGTACCGG TTGCCGGTAC GTTGTCCGAC GATGGTTTGC
TTTGGCGGCG CAGATATGAA AACGCTGTTT ATTACAACTA CCAGAGAAAA TATGTCTGCT
CAGGAAGTGG CGGATTATCC GCTCTCCGGC GCCATCTTCA CCCTGCAGGT AGCCGTCGCA
GGGATGAAGA AAAGCCGTTT TATTGAACGT CAGGCAGGTT CTACCGGCAC GACGTTTTCG
CTGGGATAG
 
Protein sequence
MTTPHVLFDY AGHLPECPTW SEDESALYWT DILEQEIHRY HPASGTHSVL AFPEEVGCFA 
LREQGGFIVA MRHAIWLADK NGLLQRKVCD NPSNTKLARF NDGGTDGDGR FYAGTFWAPG
DYNGALLMRI DHDLTAKVIQ CDIQGHNGLA FSPDNQWMYT SDTPNGVIYR TLLDKHGDPG
KRELFRHFGE GEGLPDGAAM DSEGCYWSAM FDGWRVARFS PQGEQLEEYR LPVRCPTMVC
FGGADMKTLF ITTTRENMSA QEVADYPLSG AIFTLQVAVA GMKKSRFIER QAGSTGTTFS
LG