Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2995 |
Symbol | |
ID | 6871390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2888326 |
End bp | 2889234 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642786031 |
Product | SMP-30/Gluconolaconase/LRE domain-containing protein |
Protein accession | YP_002216677 |
Protein GI | 198242725 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGC CGCACGTTTT ATTTGATTAT GCCGGACATT TACCAGAATG CCCCACATGG AGCGAGGATG AAAGCGCGCT GTATTGGACC GATATCCTGG AACAGGAGAT CCATCGTTAC CATCCGGCGA GCGGGACGCA TAGCGTGCTG GCGTTTCCGG AAGAGGTGGG CTGTTTTGCC TTGCGTGAGC AGGGCGGATT TATTGTGGCC ATGCGTCATG CTATCTGGCT GGCCGATAAA AATGGATTAT TGCAGCGTAA GGTTTGCGAC AATCCCTCTA ATACGAAACT GGCGCGTTTC AACGATGGCG GCACTGATGG CGATGGACGT TTTTATGCCG GAACGTTCTG GGCGCCAGGT GACTATAATG GCGCGTTGCT GATGCGGATC GATCATGACC TGACGGCAAA AGTGATCCAG TGCGATATCC AGGGACACAA CGGCCTGGCG TTCAGCCCGG ATAACCAGTG GATGTATACC TCCGATACGC CGAATGGCGT GATATACCGC ACGTTACTTG ATAAGCATGG CGATCCGGGC AAGCGTGAAC TTTTTCGCCA TTTTGGCGAA GGAGAAGGAC TTCCCGACGG CGCGGCGATG GATAGCGAAG GGTGCTACTG GAGCGCGATG TTTGACGGCT GGCGCGTGGC GCGTTTCTCA CCGCAAGGAG AGCAGCTGGA AGAGTACCGG TTGCCGGTAC GTTGTCCGAC GATGGTTTGC TTTGGCGGCG CAGATATGAA AACGCTGTTT ATTACAACTA CCAGAGAAAA TATGTCTGCT CAGGAAGTGG CGGATTATCC GCTCTCCGGC GCCATCTTCA CCCTGCAGGT AGCCGTCGCA GGGATGAAGA AAAGCCGTTT TATTGAACGT CAGGCAGGTT CTACCGGCAC GACGTTTTCG CTGGGATAG
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Protein sequence | MTTPHVLFDY AGHLPECPTW SEDESALYWT DILEQEIHRY HPASGTHSVL AFPEEVGCFA LREQGGFIVA MRHAIWLADK NGLLQRKVCD NPSNTKLARF NDGGTDGDGR FYAGTFWAPG DYNGALLMRI DHDLTAKVIQ CDIQGHNGLA FSPDNQWMYT SDTPNGVIYR TLLDKHGDPG KRELFRHFGE GEGLPDGAAM DSEGCYWSAM FDGWRVARFS PQGEQLEEYR LPVRCPTMVC FGGADMKTLF ITTTRENMSA QEVADYPLSG AIFTLQVAVA GMKKSRFIER QAGSTGTTFS LG
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