Gene SeD_A2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2980 
SymbolpssA 
ID6871031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2871704 
End bp2873059 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID642786017 
Productphosphatidylserine synthase 
Protein accessionYP_002216667 
Protein GI198245622 
COG category[I] Lipid transport and metabolism 
COG ID[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCAA AATTTAAGCG TAATAAACAT CAACAACACC TTGCCCAACT CCCTAAGATT 
TCTCAGTCAG TTGATGATGT AGATTTCTTT TATACTCCTG CTACTTTTCG GGAGACACTG
CTGGAGAAAA TCGCCAGCGC GACGCAGCGT ATTTGTATCG TTGCCCTGTA TCTGGAACAG
GACGATGGGG GTAAAGGTAT ACTCGACGCG CTCTATGCGG CTAAACGGCA GCGTCCTGAA
CTGGACGTGA GGGTGCTGGT CGACTGGCAT CGCGCGCAAC GCGGGCGCAT TGGCGCAGCG
GCCTCGAATA CCAATGCAGA CTGGTATTGC CGACTGGCGC AGGAAAACCC CGGCATTGAT
GTCCCGGTTT ACGGCGTACC GATTAATACG CGAGAAGCGC TTGGCGTACT GCATTTTAAA
GGCTTTATCA TTGATGATAG CGTCCTGTAC AGCGGCGCCA GCCTGAACGA TGTCTATCTC
CATCAGCATG ACAAATATCG TTACGATCGC TACCAGCTGA TTCGCAATCG GCAAATGGCA
GACATCATGT TTGACTGGGT GACGCAAAAT CTGATGAATG GCCGTGGTGT GAATCGTCTG
GATAATACCC AGCGGCCGAA AAGCCCGGAG ATTAAAAACG ATATCCGCTT ATACCGTCAG
GAGCTGCGTG ATGCGTCATA TCATTTTCAG GGTGACGCTA ATGACGAGCA GCTCTCCGTT
ACGCCGCTGG TCGGGCTTGG AAAATCTAGT CTGCTGAACA AAACCATTTT CCATCTCATG
CCCTGTGCGG AGCATAAGCT CACCATTTGT ACCCCTTACT TCAATCTACC AGCGGTACTG
GTGCGGAATA TTATTCAGCT ACTGCGCGAC GGAAAGAAAG TCGAAATCAT TGTTGGCGAT
AAAACCGCGA ATGATTTTTA CATTCCGGAA GATGAACCGT TCAAGATCAT TGGCGCGTTG
CCCTATCTCT ATGAGATTAA CCTGCGCCGC TTCCTGAGCC GTTTACAGTA TTACGTCAAT
ACCGATCAGC TTGTGGTGCG TCTGTGGAAA GATGACGACA ATACCTATCA TTTGAAAGGG
ATGTGGGTAG ATGATAAATG GATGCTACTC ACCGGCAACA ATCTGAATCC TCGCGCCTGG
CGTCTGGATC TGGAAAACGC CATTCTGATC CACGATCCTA AGCAAGAGCT TGCCCCTCAG
CGGGAAAAAG AGCTGGAACT TATCCGAACG CACACAACCA TCGTAAAACA TTATCGTGAC
CTGCAGAGCA TTGCCGACTA TCCGATAAAA GTGCGTAAAT TGATTCGCCG TCTGCGCCGG
ATCCGCATCG ACAGATTAAT TAGCCGTATC CTGTAA
 
Protein sequence
MLSKFKRNKH QQHLAQLPKI SQSVDDVDFF YTPATFRETL LEKIASATQR ICIVALYLEQ 
DDGGKGILDA LYAAKRQRPE LDVRVLVDWH RAQRGRIGAA ASNTNADWYC RLAQENPGID
VPVYGVPINT REALGVLHFK GFIIDDSVLY SGASLNDVYL HQHDKYRYDR YQLIRNRQMA
DIMFDWVTQN LMNGRGVNRL DNTQRPKSPE IKNDIRLYRQ ELRDASYHFQ GDANDEQLSV
TPLVGLGKSS LLNKTIFHLM PCAEHKLTIC TPYFNLPAVL VRNIIQLLRD GKKVEIIVGD
KTANDFYIPE DEPFKIIGAL PYLYEINLRR FLSRLQYYVN TDQLVVRLWK DDDNTYHLKG
MWVDDKWMLL TGNNLNPRAW RLDLENAILI HDPKQELAPQ REKELELIRT HTTIVKHYRD
LQSIADYPIK VRKLIRRLRR IRIDRLISRI L