Gene SeD_A2976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2976 
Symbol 
ID6872189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2866462 
End bp2867499 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content57% 
IMG OID642786013 
Productputative methyltransferase 
Protein accessionYP_002216663 
Protein GI198243831 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.697041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG AATTAAAAAA CAAAAGCGGC AAAGTCAAAG TGATGTATGT CCGTAGTGAT 
GATGACTCTG ATAAACGCAC CCATAACCCG CGTACCGGGA AAGGGGGAGG CCGCCCAGCA 
AAGTCTCGCA CTGACGGTGG ACGTCGCCCC GCCCGTGATG AGCGAAATAA TCAGAGCCGT 
GACCGTAAAC ATGAAACTTC GCCGTGGCGC ACCGTGTCCC GCGCGCCAGG CGATGAAACG 
CCTGAGAAAG TCGATCATGG TGGTATTAGC GGTAAAAGTT TTATCGACCC TGAAGTTTTG 
CGTCGCCAGC GTGCGGAAGA GACGCGCGTC TACGGTGAAA ACGCCTGCCA GGCGTTATTT 
CAGAGCCGCC CGGATGCTAT CGTTCGCGCC TGGTTTATCC AAAGCGTGAC CCCGCGCTTT 
AAAGAAGCCC TGCGCTGGAT GGCGGCGAAT CGTAAAGCCT ACCATGTGGT GGATGAAGCC 
GAACTGGCAA AAGCTTCCGG GACTGAGCAC CACGGCGGCG TGTGTTTCCT GATTAAAAAG 
CGTAACGGTA CGACCGTTAA GCAATGGGTA AAGCAGGCGG CGGATCAAGA CTGCGTGCTG 
GCGTTGGAAG ATGTCGCTAA CCCGCATAAT CTGGGCGGCA TGATGCGTAG CTGCGCGCAC 
TTCGGCGTGA AGGGCGTGGT GGTACAGGAT GCGGCGTTGC TGGAGTCCGG CGCGGCGATT 
CGTACTGCGG AAGGCGGGGC GGAGCATGTC CAGCCGATCA CTGGTGAAAG CATTGTTGAC 
GTACTGGATG ATTTTCGTCA GGCGGGGTAC ACCGTGGTGA CGACGTCCAG CGATCGCGGT 
CAGGCGCTCT TTAGTACGAC CCTGCCGGAA AAGATGGTGC TGGTCTTAGG CCGTGAATAT 
GACTACCTGC CGGAAGCGGC GCGCGAACCC GACGATCTGT GCGTGAAAAT TAACGGCACC 
GGGAACGTGG AAAGCCTGAA TGTGTCGGTT GCGACAGGCG TACTGCTCGC CGAGTGGTGG 
CGACAGAATA AAGCGTAA
 
Protein sequence
MNDELKNKSG KVKVMYVRSD DDSDKRTHNP RTGKGGGRPA KSRTDGGRRP ARDERNNQSR 
DRKHETSPWR TVSRAPGDET PEKVDHGGIS GKSFIDPEVL RRQRAEETRV YGENACQALF 
QSRPDAIVRA WFIQSVTPRF KEALRWMAAN RKAYHVVDEA ELAKASGTEH HGGVCFLIKK 
RNGTTVKQWV KQAADQDCVL ALEDVANPHN LGGMMRSCAH FGVKGVVVQD AALLESGAAI 
RTAEGGAEHV QPITGESIVD VLDDFRQAGY TVVTTSSDRG QALFSTTLPE KMVLVLGREY 
DYLPEAAREP DDLCVKINGT GNVESLNVSV ATGVLLAEWW RQNKA