Gene SeD_A2953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2953 
Symbol 
ID6874729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2848267 
End bp2849193 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content43% 
IMG OID642785992 
Productputative transcriptional regulator 
Protein accessionYP_002216642 
Protein GI198244987 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCA AACAACTACA CTCCTTCCTG ATATTGTGTG ATGAATTACA TTATGGTCGG 
GCAGCCAGTC GCCTGTTTAT CACTCAGCCA TCATTAAGTC AGCAAATCAA ACAACTTGAG 
TCATCACTTA AAACAATATT ATTTAAGCGA AAAGGTAGAG GAATTAAATT AACAAAAGCA 
GGCATTATTT TGCAACGACA CGCTAACAAA ATAATGCTGG ATTTAAAAAA TGCCGAAAAT 
GAACTTCTTC CCTATCAGGA CCAACAGCGC GATACTATTT CAATCGGGGT GTCAGGCAGT 
TACCTGGTCC TGCCCGCTTT TCGCAACTTT ATGGCGCACC ATCCGGAAAT ATCTTTAAAT 
GTTAAAGAGT TCTCAACTGA GCAAACCATT AAAAAGCTGA CGGATAGCGC CGTTGATATT 
GGCATTGTTT ATCGAACAGC GCTCCCTGCC CAGCTAAGCT CGACCATGCT GTTTGAAGAT 
GAAATTATCG CTGCAATCCC ACTTTCTCAT CCTCTGGCGA CACGCGAACG TCTGCATTTA 
AAAGATTTAA ACGACCAGCC CATTATCGTG CTTAATGACT CTCTGCTATT AAGAGGGATC 
ATCACCACAG AATTTAATAA CCGCAAAGTC GTTCCTAACG TCATCTGCGA ACTGGATAAC 
CACTACTCAT GCCTTGAGTA TGCCGAAGCG CAGATTGGCA TCGCATTTAT TACCCGCTCG 
CTAACCCATT TATCGACACC CAAAAATGTT CGCCTGGTTT CACTGGGCAT CCCCGCATTC 
TTTATTCCTG TCATGCTGGT GCACAGTAAT GACCTTTCAC TGGATAACGC AACCATCTGC 
CTGCTCAAGC AGATCAAAAA TTTTTACACG GTAGATAACA AATCAGCGCC AGAAAAGAGC 
TGGCCCGAGC AGAAAATAGG CGTATAA
 
Protein sequence
MNIKQLHSFL ILCDELHYGR AASRLFITQP SLSQQIKQLE SSLKTILFKR KGRGIKLTKA 
GIILQRHANK IMLDLKNAEN ELLPYQDQQR DTISIGVSGS YLVLPAFRNF MAHHPEISLN 
VKEFSTEQTI KKLTDSAVDI GIVYRTALPA QLSSTMLFED EIIAAIPLSH PLATRERLHL 
KDLNDQPIIV LNDSLLLRGI ITTEFNNRKV VPNVICELDN HYSCLEYAEA QIGIAFITRS 
LTHLSTPKNV RLVSLGIPAF FIPVMLVHSN DLSLDNATIC LLKQIKNFYT VDNKSAPEKS 
WPEQKIGV