Gene SeD_A2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2950 
Symbol 
ID6871928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2845129 
End bp2845977 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID642785989 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002216639 
Protein GI198242293 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGTT TGATTCGTAT TCGCCAGCGT TATCCGGATC TCGCGCAAAG CGACAGGAAA 
CTGGCGGATT ATCTGCTCGC GCAACCGGAT ACAGCGCGAC ATCTGAGCTC GCAGCAACTG 
GCGGCCGAAG CGGGCGTCAG CCAATCCAGC GTAGTCAAAT TCGCGCAAAA ACTGGGGTTT 
AAAGGGTTTC CTGCATTGAA ACTGGCTATC AGCGAAGCGT TGGCCAGCAA TCCTAATCCG 
CATTCCGTTC CCGTTCATAA CCAGATTCGC GGCGACGATC CGATGCGCCT GGTCGGGGAA 
AAATTAATTA AAGAGAATGT GGCGGCGATG CACGCCACGC TGGACGTTAA CAGTGAAGAA 
AAGCTGTTAG AAAGCGTCAC GATGCTGCGT CACGCCCGCC GTATTGTGAT CACCGGGATT 
GGCGCCTCTG GGCTGGTGGC GCAAAATTTT GCCTGGAAGC TACTGAAGAT TGGCATTAAC 
GCGGTGGTTG AGCGCGATAT GCACGCCCTG CTGGCAACAG TGCAGGCGCT GGCGCCGGAG 
GATCTGCTGC TGGCGATCTC TTATTCCGGG GAACGGCGCG AGCTGAACCT GGCGGCGGAC 
GAAACATTAC GCGCAGGCGC GAAGATCCTG GCCATTACCG GTTTTTCTCC CAACGCCTTG 
CAGCAGCGCG CCACCCGCTG TCTGTATACG ATTGCCGAAG AGCAGGCGAC GCGCAGCGCC 
GCTATCTCCT CGACACATGC GCAAATGATG TTGACCGACT TACTGTTTAT GGCGCTGGTA 
CAACAGGATT TAGAGCGGGC GCCGGAGCGT ATTCGCCATA GCGAGGCGCT GGTAAAAAAA 
CTGGTTTGA
 
Protein sequence
MNCLIRIRQR YPDLAQSDRK LADYLLAQPD TARHLSSQQL AAEAGVSQSS VVKFAQKLGF 
KGFPALKLAI SEALASNPNP HSVPVHNQIR GDDPMRLVGE KLIKENVAAM HATLDVNSEE 
KLLESVTMLR HARRIVITGI GASGLVAQNF AWKLLKIGIN AVVERDMHAL LATVQALAPE 
DLLLAISYSG ERRELNLAAD ETLRAGAKIL AITGFSPNAL QQRATRCLYT IAEEQATRSA 
AISSTHAQMM LTDLLFMALV QQDLERAPER IRHSEALVKK LV