Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2945 |
Symbol | |
ID | 6871028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | + |
Start bp | 2839938 |
End bp | 2841482 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642785984 |
Product | putative transglycosylase |
Protein accession | YP_002216634 |
Protein GI | 198244635 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAAAT TAAAGATTAA TTATCTGTTC ATCGGCATAT TGACGCTGCT GCTGGCAGCA GCCCTTTGGC CCTCAATCCC CTGGTTCGGT AAAACCGAAA ACCATATCGC CGCGATTCAA GCCCGGGGGA TACTGCGCGT CAGTACGATC GACTCGCCAT TAACCTATTC CGTTATCAAC GGTAAAAAAT ATGGTCTGGA CTATGAACTG GCGCAGCAGT TCGCCAACTA TCTCGGCGTG AAGCTGAAAG TGACGGTGCG CCAGAATATC AGCCAGTTGT TTGACGATCT GGATAACGGC AATGCCGACC TGCTCGCGGC AGGGCTGGTC TACGACAGCG CACGCGTTAA AAACTATCAG CCCGGTCCCA TGTATTACTC GGTTTCGCAA CAGCTCGTCT ACCGGGTCGG ACAATATCGC CCACGTTCGC TGGCGACCGT TAACGAGAAT CAGCTTACCA TTGCGCCAGG GCACGTCGTG GTCAATGACT TACAGCGTTT AAAAGAGACA AAGTTTCCCG ACCTGAGCTG GAAAGTGGAT GATAAAAAAG GCTCGACGAC GCTGCTGGAA GAGGTCATCA GCGGCAAACT GGATTACACC ATTGCCGATT CAGTGGCGAT CAGTCTGTTT CAGCGCGTTC ATCCCGAGCT GGCCGTGGCG CTGGATGTCA CGGATGAACA GCCCGTGACC TGGTTTAGCC GACTGGACGA CGATAATACG CTCTCCGCCG CGCTGCTCGA TTTTTTCAAT TCGATCAATG AAGACGGGTC GTTGGCGCGG ATCGAAGAGA AATATCTGGG ACATGGCGAT GATTTCGACT ACGTTGATAC CCGCTCTTTC CTGCGAGCGG TAGATAACGT CCTGCCGGAG CTGGAACCGT TATTTAAAAA ATATGCCAAA GAGATAGACT GGCGCCTGCT GGCGGCGATT TCTTATCAGG AATCACACTG GGACCCGCTG GCGACCTCGC CAACCGGCGT GCGCGGCCTG ATGATGCTGA CTAAAAATAC CGCCCAAAGT CTGGGGCTGA CCGACCGTAC CGATGCGGAG CAAAGCATCA GCGGCGGCGC TCGCTATCTT GAAGATATGA TGGCTAAAGT TCCCGAAACC GTTCCGGAAG ACGAGCGTAT CTGGTTTGCC TTAGCCGCCT ACAATATGGG TTATGCGCAC ATGCTCGATG CCAGATCGCT GACGGTAAAA ACCAAAGGCA ATCCGGATAG CTGGACCGAT GTGAAGCAGC GTTTGCCGCT ATTAAGCCAA AAACCGTATT ACAGTAAGTT AACCTACGGT TACGCGCGTG GACATGAGGC TTATGCTTAT GTGGAAAATA TCCGTAAATA CCAGATAAGT TTGGTGGGGT ATTTGCAGGA AAAAGAAAAG CAGGAAGCGG AAGCTATGAA ACTGGCGCAG GATTACCCGG CGGTGTCGCC GGAGGAGCTG AATAAAGCAC CCTTCCCCTT CCTGTCGTTT TTATCGCAGT CATCAGGCTA CCTGACGCAT TCGCCGTCTT TACTGTTTAC GCCGCAGAAG AAAGAAGAAA AATAG
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Protein sequence | MKKLKINYLF IGILTLLLAA ALWPSIPWFG KTENHIAAIQ ARGILRVSTI DSPLTYSVIN GKKYGLDYEL AQQFANYLGV KLKVTVRQNI SQLFDDLDNG NADLLAAGLV YDSARVKNYQ PGPMYYSVSQ QLVYRVGQYR PRSLATVNEN QLTIAPGHVV VNDLQRLKET KFPDLSWKVD DKKGSTTLLE EVISGKLDYT IADSVAISLF QRVHPELAVA LDVTDEQPVT WFSRLDDDNT LSAALLDFFN SINEDGSLAR IEEKYLGHGD DFDYVDTRSF LRAVDNVLPE LEPLFKKYAK EIDWRLLAAI SYQESHWDPL ATSPTGVRGL MMLTKNTAQS LGLTDRTDAE QSISGGARYL EDMMAKVPET VPEDERIWFA LAAYNMGYAH MLDARSLTVK TKGNPDSWTD VKQRLPLLSQ KPYYSKLTYG YARGHEAYAY VENIRKYQIS LVGYLQEKEK QEAEAMKLAQ DYPAVSPEEL NKAPFPFLSF LSQSSGYLTH SPSLLFTPQK KEEK
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