Gene SeD_A2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2929 
Symbol 
ID6872308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand- 
Start bp2819887 
End bp2821026 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content58% 
IMG OID642785970 
Productputative 3-phenylpropionic acid transporter 
Protein accessionYP_002216620 
Protein GI198242790 
COG category 
COG ID 
TIGRFAM ID[TIGR00902] phenyl proprionate permease family protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC ATTCCACGTG CTGGCTGGCG CTCAGTTATT TCACCTACTT CTTTAGTTAC 
GGTATTTTTC TGCCCTTCTG GAGCGTCTGG CTCAAAGGTC TTGGGCTAAC GCCGGAAACC 
ATCGGTCTTC TGCTGGGCGT GGGTCTGGTC GCGCGTTTTC TCGGTAGTCT GCTCATTGCG 
CCTCGCGTAA GCGATCCTTC GCGGTTGATC TCCGCGCTGC GCGTACTGGC ATTGCTGACG 
CTGGTATTTG CGCTGGCATT TTGGGCAGGA ACGCATGTCG CGTGGCTAAT GGTGGTGATG 
GTTGGGTTTA ACCTCTTCTT TTCACCACTG GTGCCGCTGA CCGATGCGCT GGCCAATACC 
TGGCAAAAGC AAATTACCCT GGACTATGGT CGGGTGCGGC TGTGGGGGTC CATCGCCTTC 
GTGATAGGGT CGGCGCTGAC CGGTAAGCTG GTGAGTTTAT ACGATTACCA GGCGATTCTG 
GCGCTACTGA CGCTCGGCGT CGCCTCGATG TTGCTGGGTA TGTTGTTACG TCCCAGCGTG 
CCGCCGCAAG GGGAAAGCCG TCAGCAGGAG AGCGCAGGCT GGCCCGCCTG GCGTACGCTG 
GTGGCACAAA GTTGGCGTTT TCTCGCCTGC GTCTGTTTGC TGCAAGGGGC GCACGCCGCC 
TACTACGGTT TTAGCGCCAT CTACTGGCAG GGGGCTGGCT ATTCAGCATC GGCGGTCGGC 
TATTTATGGT CGTTGGGCGT GGTGGCGGAA GTGATCATTT TCGCCCTGAG TAAAAAGCTA 
TTTCGCCGGT TTAGCGCCCG CGACTTGCTG TTGCTTTCCG CTGTGTGCGG CGTGGTACGC 
TGGGGACTGA TGGGCTGGAG TACGGCGTTT CCGTGGCTGA TTGTGATACA AATCCTGCAC 
TGTGGCACGT TTACCGTTTG CCATCTGGCC GCCATGCGCT ATATCGCTGC GCGTCAGGGA 
AGCGAGGTGA TTCGTTTGCA GGCCGTCTAT TCCGCTGTGG CGATGGGCGG CAGCATCGCG 
ATTATGACGG TATTTGCCGG TTTTCTGTAT CAACATCTGG GCGGCGGCGT GTTCTGGATT 
ATGGCGCTGG TGGCATTGCC CGCTATCTTC CTTCGGCCCA AAGTGGTTGC CGCGTCATGA
 
Protein sequence
MALHSTCWLA LSYFTYFFSY GIFLPFWSVW LKGLGLTPET IGLLLGVGLV ARFLGSLLIA 
PRVSDPSRLI SALRVLALLT LVFALAFWAG THVAWLMVVM VGFNLFFSPL VPLTDALANT 
WQKQITLDYG RVRLWGSIAF VIGSALTGKL VSLYDYQAIL ALLTLGVASM LLGMLLRPSV 
PPQGESRQQE SAGWPAWRTL VAQSWRFLAC VCLLQGAHAA YYGFSAIYWQ GAGYSASAVG 
YLWSLGVVAE VIIFALSKKL FRRFSARDLL LLSAVCGVVR WGLMGWSTAF PWLIVIQILH 
CGTFTVCHLA AMRYIAARQG SEVIRLQAVY SAVAMGGSIA IMTVFAGFLY QHLGGGVFWI 
MALVALPAIF LRPKVVAAS