Gene SeD_A2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2922 
Symbol 
ID6871523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand+ 
Start bp2812990 
End bp2813802 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content52% 
IMG OID642785963 
Producthypothetical protein 
Protein accessionYP_002216613 
Protein GI198242294 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0547167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTC AACATACCCG ACGCATCGTC AAATCCCTTT TTATTCTGTT TATCATTGTG 
GTCTGTATTT ATCTGCTACC CCGCGTAGCG ATCAATGCCT TTTATTACCC GGACAATAAA 
GTCTATGGGC CAACCCCTGC CGAAGCTGAA TCCATTACCT TTACCGCCAA AGATGGCACG 
CATCTGCACG GCTGGTTTAT TCCCACTGCT TTCGGCAGGC CGGAAAACGC CGTCGCGACG 
GTGATTCATG TCCATGGCAA CGCCGGAAAT ATGTCGGCGC ACTGGCCGTT AGTCAGTTGG 
CTGCCAGAAC GCAACGTAAA CCTGTTTATG TTTGATTACC GTGGTTTTGG GCGGCATCGC 
GCCGACGTTA ACCCCGAGCG CCTGGTACTG CTGGGGCAGA GCCTGGGCGG CAATAATGTA 
CTGGCCGCCG TAGGCCACTG CGTAGGCTGC GCAAATATGC GCTACGCCGA CCAGGCGGGC 
ATACGTGCGA TTATCCTTGA CTCAACGTTT TTATCCTATT CCTCCATCGC CAACCAGATG 
ATCCCGGGCA GCGGCTATTT GCTTGATGAC CGCTATAGCG CGGATCGCAA TATTGCCAGC 
GTCAGCCCCA TTCCGGTATT GATTCTTCAT GGCACGGCAG ACCATGTTAT TCCCTGGCAG 
GACAGTGAGA AATTGTATGC CCTCGCCCGG GAGCCCAAAC AAAAAATCTT CATTCCTGAC 
GGCGATCACA TTGATGCTTT TTCCGGACGT TATGCAAACC TTTACCGTGA TGCAATGATT 
AAATTTATTC AGACCGCGCT ATCCGCTAAA TAG
 
Protein sequence
MTLQHTRRIV KSLFILFIIV VCIYLLPRVA INAFYYPDNK VYGPTPAEAE SITFTAKDGT 
HLHGWFIPTA FGRPENAVAT VIHVHGNAGN MSAHWPLVSW LPERNVNLFM FDYRGFGRHR 
ADVNPERLVL LGQSLGGNNV LAAVGHCVGC ANMRYADQAG IRAIILDSTF LSYSSIANQM 
IPGSGYLLDD RYSADRNIAS VSPIPVLILH GTADHVIPWQ DSEKLYALAR EPKQKIFIPD 
GDHIDAFSGR YANLYRDAMI KFIQTALSAK