Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2920 |
Symbol | |
ID | 6872504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2811192 |
End bp | 2811923 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642785961 |
Product | RNA methyltransferase |
Protein accession | YP_002216611 |
Protein GI | 198242671 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0565] rRNA methylase |
TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0175386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAAA ACATTCGAAT TGTGCTGGTG GAAACCTCCC ACACCGGCAA TATGGGCTCT GTGGCTCGCG CTATGAAAAC CATGGGCTTA ACCAACCTGT GGCTGGTAAA CCCGTTGGTG AAACCGGACT CCCAGGCCAT CGCCCTGGCG GCAGGCGCCA GCGATGTGAT CGGTAATGGG CAGATCGTCG ATACGCTGGA TGAAGCGTTG GCTGGCTGTA GCCTGGTGGT CGGCACCAGC GCCCGTTCCC GCACTTTGCC GTGGCCGATG CTTGATCCGC GCGAGTGCGG CTTAAAAAGC GTGGCGGAAG CGGCAAATAC GCCGGTTGCG CTGGTTTTTG GTCGTGAGCG TGTCGGGCTG ACTAACGATG AGTTGCAAAA ATGCCATTAT CACGTCGCTA TTGCCGCTAA CCCGGAGTAC AGCTCGTTGA ATCTGGCGAT GGCGGTACAG GTCATCGCGT ATGAAGTCCG CATGGCCTGG CTGGCGACGC AGGAAAACGG CGACGCGGCA GATCATGAAG AGACGCCGTA TCCGCTGGTG GACGATCTTG AACGCTTCTA CGGCCATCTG GAGCAGACGT TGCTCTCCAC TGGCTTTATT CGCGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGCGCCCGC CCGGAAAGCC AGGAGTTGAA TATTCTGCGT GGGATTCTGG CGTCTATTGA GCAGCAGAAT AAAGGCAAGT AA
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Protein sequence | MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNG QIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL TNDELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGDAA DHEETPYPLV DDLERFYGHL EQTLLSTGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN KGK
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