Gene SeD_A2920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2920 
Symbol 
ID6872504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2811192 
End bp2811923 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID642785961 
ProductRNA methyltransferase 
Protein accessionYP_002216611 
Protein GI198242671 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0175386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAAA ACATTCGAAT TGTGCTGGTG GAAACCTCCC ACACCGGCAA TATGGGCTCT 
GTGGCTCGCG CTATGAAAAC CATGGGCTTA ACCAACCTGT GGCTGGTAAA CCCGTTGGTG
AAACCGGACT CCCAGGCCAT CGCCCTGGCG GCAGGCGCCA GCGATGTGAT CGGTAATGGG
CAGATCGTCG ATACGCTGGA TGAAGCGTTG GCTGGCTGTA GCCTGGTGGT CGGCACCAGC
GCCCGTTCCC GCACTTTGCC GTGGCCGATG CTTGATCCGC GCGAGTGCGG CTTAAAAAGC
GTGGCGGAAG CGGCAAATAC GCCGGTTGCG CTGGTTTTTG GTCGTGAGCG TGTCGGGCTG
ACTAACGATG AGTTGCAAAA ATGCCATTAT CACGTCGCTA TTGCCGCTAA CCCGGAGTAC
AGCTCGTTGA ATCTGGCGAT GGCGGTACAG GTCATCGCGT ATGAAGTCCG CATGGCCTGG
CTGGCGACGC AGGAAAACGG CGACGCGGCA GATCATGAAG AGACGCCGTA TCCGCTGGTG
GACGATCTTG AACGCTTCTA CGGCCATCTG GAGCAGACGT TGCTCTCCAC TGGCTTTATT
CGCGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGCGCCCGC
CCGGAAAGCC AGGAGTTGAA TATTCTGCGT GGGATTCTGG CGTCTATTGA GCAGCAGAAT
AAAGGCAAGT AA
 
Protein sequence
MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNG 
QIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL
TNDELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGDAA DHEETPYPLV
DDLERFYGHL EQTLLSTGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN
KGK