| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2900 |
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| Symbol | |
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| ID | 6874153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2790589 |
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| End bp | 2792967 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642785944 |
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| Product | anaerobic dimethyl sulfoxide reductase chain a |
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| Protein accession | YP_002216594 |
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| Protein GI | 198244171 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.735186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA TAAAAAGCCA GGGAAATGGC GAACAGCCCG CTATTTCTCG CCGCCACTTT
ATCCAGGCCA GCTCCGCGCT TATTGCGTTA CCGTTTGTCT CCTCGCCAGC TACCGCTCAG
GCGCGCGCTG TGACGGCCAC TGAAAACAGG CCTGCGGAAA AAGTCGTTCA GACATGCAGC
ACTTTTGACT GCGGGGGCAA ATGCGATATT CGGGCGCATG TTAGTGACGG TATCGTGACG
CGAATTTCAA CGCGACCGGA TAATGCGCTG GATGCGCAAA TGCCGGTGAT GCGTGCCTGT
GTTCGTGGAC GCGCATACCG TAAATTTGTT TATCACCCCG ATAGACTTAA ATATCCCATG
AAGCGTGTAG GAAAACGCGG TGAAGGAAAG TTCGAGCGAA TTTCCTGGGA TGAAGCGACA
ACCTTAATCG CCGATAATTT AAAATCGATT ACTGAAAAAT ATGGCCCGGC TTCGCGCTAT
GTTCATGTTG GCACCGCCGT TTCCGGCGGC ACCTTTTCCG GCGATAAAAT GGCGCGTCGC
CTGCTGAATC TGACCGGCGG CTATCTCGAA AGCTACCATT CTGTGAGTAT GGGCAATACG
GCGGCCGCGA CGCCTTATAC TTACGGCATT GCCGCCAGCG GCAGTTCGCT GGATACGCTT
TTGGACACCA AACTGGTGAT TCTGTGGGGC CATAACCCGA CGGAGACCAT TTTTGGTCAT
ACCAACTATT TCTTGCAGAA GATGAAGCAG AACGGTACGC GGTTTATCGT GGTCGATCCG
CGCTATTCCG ACACCGTTTC CTCGCTGGCG GATCAGTGGA TCCCGCTGCT GCCCACCACC
GACAATGCGC TGATGGACGC GATGATGTAC GTCATCATCA GCGAGAATCT GCACGATCGC
GCATTTATTG CGCGCTACGC TATCGGTTTT GACGAAGACT CAATGCCGGA AGGCGTACCG
GCTAACGAAT CGCTGGTGGC GTATCTGACC GGCGCCAAAG ACGGTGTCGT TAAGTCCCCC
GAGTGGGCGG AAAAGATCAC CCATGTGCCG GCGCAAACCA TACGCCAGTT AGCGCGTGAT
TACGCGAATA CCAAACCCGC CGCGTTGATT CAGGGGTGGG GACCACAGCG CCACAACTGC
GGCGAGCGCA CCGCGCGCGG CTCGACCCTA CTGGCGACCA TTACCGGTAA TGTCGGCATC
AAAGGCGGTT GGGCTGCGGG TTATGGCGGC TGCGCTAACC GTAAATTTGC CGCGGGTCCG
GAGATGCCGG ATAACCCGGT AAAAGCCAAA ATTTCGGTGA TGAACTGGGT GCAGGCCGCA
GACGACGCCA GCAAAGTGAC GCCGGATATG GGGCTGAAAG ATGCCGATAA GCTGGACAGT
AACATCCGTA TTCTGTTCTC GCTGGCCGGG AACTATCTGG CGAATCAGAA CCCCGATCTG
CACCAGGCGG TACGCGTACT GGAGGATGAA TCAAAGATCC AGTTTATTGT CGCCAGCGAT
CTGTTTATGA CGCCGAGCGC GAAATACGCT GATCTACTGC TGCCGGAAAC CAGCTTTATG
GAACGCTGGA ACATCGGTGA AACCTGGGGC ACGGCAAGCT ACCTGATACT CTCTGAAAAA
CTGATCGAGC CTGAATTTGA GCGGCGCTCC GACTACGACT GGCTACGTGA GGTGGCGGCG
AAATTAGGCA TTGAAAACGA ATTTAGCCAG GGGCGCGATG AGAAAGCGTG GATTGAACAC
ATCTGGGAAC AGACGCGCCT GGCGATGCCG GACGAAAATC TACCGGATTT CGCCACGCTG
CAAAAGACCC GTCAGCATCT GTTCAAAAGC GCGCCATTTA TCGCCTTTGA AGACAATATT
CGCGATCCGG ACAATCATCC GTTCCCGACG CCGTCAGGGA AAATAGAGAT CTTCTCGAAG
CGCCTGTACG ACATGCAGCA TCCGGAAATC CCGGCGTTGT CGCACTACGT TCCCGCGCAT
GAAGGCCCGG AGGATGCGCT GGTGAAAGAT TTTCCGCTCC AGTTAATTAC GTGGAAAGGA
AAAAACCGCG CCAACTCAAC GCAATACGCT AACCCGTGGC TGATTGAAGT GCAGCAGCAG
ACATTGTGGA TCAACCCGCA GGATGCGCAA AAGCGCGGCA TTACGCATGG CGACATGGTG
CGTATTCATA ACTCACGCGG GATTTGCGAA ATCCCGGCGG AAGTGACGCC GCGCATTATT
CCCGGCGTTG TCGCAATGCA GGCTGGCGCC TGGTGGCAGC CGGATGAAAA CGGCGTTGAT
AAAGGCGGCT GTGCGAACGT CCTCAGCTCG GCCCGTATTA CCGCGCTGGC GAAGGGAAAT
TCACATCAAA CCATGCTGGT GGAGGTGGCT AAAGCATGA
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| Protein sequence | MKNIKSQGNG EQPAISRRHF IQASSALIAL PFVSSPATAQ ARAVTATENR PAEKVVQTCS
TFDCGGKCDI RAHVSDGIVT RISTRPDNAL DAQMPVMRAC VRGRAYRKFV YHPDRLKYPM
KRVGKRGEGK FERISWDEAT TLIADNLKSI TEKYGPASRY VHVGTAVSGG TFSGDKMARR
LLNLTGGYLE SYHSVSMGNT AAATPYTYGI AASGSSLDTL LDTKLVILWG HNPTETIFGH
TNYFLQKMKQ NGTRFIVVDP RYSDTVSSLA DQWIPLLPTT DNALMDAMMY VIISENLHDR
AFIARYAIGF DEDSMPEGVP ANESLVAYLT GAKDGVVKSP EWAEKITHVP AQTIRQLARD
YANTKPAALI QGWGPQRHNC GERTARGSTL LATITGNVGI KGGWAAGYGG CANRKFAAGP
EMPDNPVKAK ISVMNWVQAA DDASKVTPDM GLKDADKLDS NIRILFSLAG NYLANQNPDL
HQAVRVLEDE SKIQFIVASD LFMTPSAKYA DLLLPETSFM ERWNIGETWG TASYLILSEK
LIEPEFERRS DYDWLREVAA KLGIENEFSQ GRDEKAWIEH IWEQTRLAMP DENLPDFATL
QKTRQHLFKS APFIAFEDNI RDPDNHPFPT PSGKIEIFSK RLYDMQHPEI PALSHYVPAH
EGPEDALVKD FPLQLITWKG KNRANSTQYA NPWLIEVQQQ TLWINPQDAQ KRGITHGDMV
RIHNSRGICE IPAEVTPRII PGVVAMQAGA WWQPDENGVD KGGCANVLSS ARITALAKGN
SHQTMLVEVA KA
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