Gene SeD_A2899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2899 
SymboldmsB 
ID6874579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2789963 
End bp2790592 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content55% 
IMG OID642785943 
Productdimethylsulfoxide reductase, chain B 
Protein accessionYP_002216593 
Protein GI198244744 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGT TTACACATTA CCCGCCGGTG AGCGATAAAC AACTGGGGTT TTTCATCGAC 
TCCTCACGCT GCTCCGGTTG TAAAGCCTGC CAGGTGGCCT GCAAAGACAA AAACAATCTG
GAAGTAGGCC GTCGTTTCCG CCGCGTCTAT GAAGTCAAGG GCGGAAGTTT CATCCCGACC
GGGCAGGGCG GGGTCAGCAA TAACGTATTT GCTTATACGC TTTCTATTTC CTGCAATCAC
TGTGCGGACC CTGTCTGCAC CAAGAATTGC CCGACTACCG CTATGCATAA ACGCCCGGGC
GACGGCATCG TGCGCGTTGA TACCGACAAA TGCGTCGGCT GTGGCTATTG CGCTTGGTCC
TGCCCTTACG GCGCGCCGCA GCTTAACGAG CAGACCGGCC AAATGTCCAA GTGCGACATG
TGCGTTGATT TACTGGCGAA AGGTGAACCG CCCGTCTGTG TTGCGACCTG TCCGCTGGAG
GCCATCAAGT TTGCTCCGAT TGATGAACTG CGCGCGAAGT ACGGTAGCGT ATGCGACGTT
AACGGGCTGC CAGATTCATC CATAACCAAA CCTAATCTGG TTGTCAAAGC GCATCAGGGC
GCAGAAAAAG AGGGTAAACG CCATGCATGA
 
Protein sequence
MSQFTHYPPV SDKQLGFFID SSRCSGCKAC QVACKDKNNL EVGRRFRRVY EVKGGSFIPT 
GQGGVSNNVF AYTLSISCNH CADPVCTKNC PTTAMHKRPG DGIVRVDTDK CVGCGYCAWS
CPYGAPQLNE QTGQMSKCDM CVDLLAKGEP PVCVATCPLE AIKFAPIDEL RAKYGSVCDV
NGLPDSSITK PNLVVKAHQG AEKEGKRHA