Gene SeD_A2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2895 
Symbol 
ID6871276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2786373 
End bp2787539 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content52% 
IMG OID642785939 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionYP_002216589 
Protein GI198245006 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAC AAATTGTCAC ACCTGAAAGC AGTACCCCGG TAGTTCTTAA CAACGAAACA 
AAAATCAACC TGCTGGATCT CAACCGTCAG CAGATGCGCG AGTTTTTTAA AAACTTAGGT
GAAAAGCCTT TCCGCGCCGA TCAGGTGATG AAATGGATGT ATCACTATTG CTGCGATAAT
TTTGATGAGA TGACCGACAT CAACAAAGTG TTGCGCGGCA AATTAAAAGA GGTCGCGGAA
ATCCGCGCGC CGGAGGTCGT TGAAGAGCAG CGTTCCTCAG ACGGCACCAT TAAGTGGGCG
ATTGCTGTCG GCGATCAGCG CGTTGAAACG GTCTATATCC CGGAAGACGA CCGCGCTACG
CTGTGTGTCT CTTCACAGGT AGGATGCGCG CTGGAGTGCA AGTTTTGTTC AACTGCGCAG
CAGGGCTTTA ACCGCAACCT GCGCGTATCG GAAATTATCG GTCAGGTCTG GCGTGCGGCG
AAAATCGTCG GCGCGGCCAA AGTCACCGGC CAGCGTCCGA TCACCAACGT GGTCATGATG
GGGATGGGCG AGCCATTGCT TAACCTGACC AATGTCGTAC CGGCGATGGA AATTATGCTC
GATGACTTTG GTTTCGGCCT GTCCAAACGT CGTGTCACGC TCTCAACGTC AGGCGTGGTG
CCTGCGCTGG ATAAACTGGG CGATATGATA GATGTCGCGC TGGCTATCTC CTTACATGCG
CCGAATGACA CTATTCGCGA CGAAATCGTC CCGATCAACA AAAAATACAA TATCGAAACG
TTCCTGGGCG CGGTTCGCCG CTATCTGGAG AAATCCAACG CCAATCAGGG GCGCGTGACG
ATTGAATACG TGATGCTTGA CCACGTCAAC GACGGCACTG AACACGCGCA TCAACTGGCG
GAGCTACTAA AAGAGACGCC TTGTAAGATT AATCTGATTC CGTGGAACCC GTTCCCTGGC
GCGCCGTATG GCCGCAGCTC TAACAGCCGT ATCGATCGCT TTTCTAAAGT TTTGATGAGT
TATGGTTTCA CGACCATCGT ACGCAAGACG CGTGGCGATG ACATTGATGC GGCATGCGGA
CAGTTGGCAG GCGATGTGAT TGACCGTACT AAACGTACCC TGCGTAAGCG TATGCAGGGA
GAGGTGATTG ACATCAAGGC TATTTGA
 
Protein sequence
MSEQIVTPES STPVVLNNET KINLLDLNRQ QMREFFKNLG EKPFRADQVM KWMYHYCCDN 
FDEMTDINKV LRGKLKEVAE IRAPEVVEEQ RSSDGTIKWA IAVGDQRVET VYIPEDDRAT
LCVSSQVGCA LECKFCSTAQ QGFNRNLRVS EIIGQVWRAA KIVGAAKVTG QRPITNVVMM
GMGEPLLNLT NVVPAMEIML DDFGFGLSKR RVTLSTSGVV PALDKLGDMI DVALAISLHA
PNDTIRDEIV PINKKYNIET FLGAVRRYLE KSNANQGRVT IEYVMLDHVN DGTEHAHQLA
ELLKETPCKI NLIPWNPFPG APYGRSSNSR IDRFSKVLMS YGFTTIVRKT RGDDIDAACG
QLAGDVIDRT KRTLRKRMQG EVIDIKAI