| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A2892 |
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| Symbol | ispG |
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| ID | 6875806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011205 |
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| Strand | - |
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| Start bp | 2783932 |
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| End bp | 2785050 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642785936 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_002216586 |
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| Protein GI | 198243362 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.825849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAACC AGGCTCCGAT TCAACGTAGA AAATCGACAC GTATTTACGT TGGGAATGTG
CCGATTGGCG ATGGCGCCCC CATCGCCGTC CAGTCGATGA CTAACACGCG TACCACTGAC
GTGGAAGCGA CGGTTAATCA GATCAAAGCG CTGGAACGCG TTGGCGCAGA TATTGTTCGT
GTTTCTGTAC CGACCATGGA CGCCGCCGAA GCGTTCAAGC TTATCAAACA GCAGGTTAAC
GTCCCGCTGG TTGCCGATAT TCACTTCGAC TACCGCATTG CGCTGAAAGT AGCGGAATAC
GGCGTTGACT GCTTGCGTAT CAACCCCGGC AATATCGGTA ACGAAGAACG CATTCGCATG
GTGGTGGACT GCGCGCGCGA CAAAAACATC CCTATTCGTA TAGGCGTAAA TGCCGGATCG
CTGGAAAAAG ATCTGCAGGA AAAATACGGT GAGCCGACGC CGCAGGCGCT GCTGGAATCA
GCCATGCGCC ATGTCGATCA TCTCGATCGT CTCAACTTTG ATCAGTTCAA AGTGAGCGTA
AAAGCGTCCG ATGTATTCCT TGCCGTTGAG TCTTATCGTT TGTTGGCTAA ACAGATCGAT
CAGCCGCTGC ATCTGGGGAT CACCGAAGCG GGCGGCGCGC GTAGCGGGGC GGTCAAGTCG
GCGATCGGTT TAGGTCTGCT GTTATCGGAA GGTATCGGCG ACACGCTGCG CGTATCGTTG
GCGGCCGACC CGGTGGAAGA GATCAAAGTC GGTTTCGATA TTCTGAAGTC GCTGCGCATT
CGCGCGCGCG GCATCAATTT CATCGCCTGC CCGACCTGTT CTCGCCAGGA GTTCGACGTT
ATCGGCACGG TGAACGCGCT GGAGCAGCGT CTGGAAGATA TCATCACCCC GATGGACGTC
TCGATCATCG GTTGCGTAGT GAACGGGCCG GGCGAAGCGC TGGTATCGAC GCTGGGCGTG
ACGGGCGGCA ATAAGAAAAG CGGCCTGTAT GAAGACGGCG TGCGTAAGGA CAGACTCGAT
AACGACGATA TGATCGCGCA GCTTGAATCC CGTATTCGCG CGAAAGCAAG TCAACTTGAT
GAAGCGCGTC GGATTGACGT GCTGCAGGTT GAAAAATAA
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| Protein sequence | MHNQAPIQRR KSTRIYVGNV PIGDGAPIAV QSMTNTRTTD VEATVNQIKA LERVGADIVR
VSVPTMDAAE AFKLIKQQVN VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNEERIRM
VVDCARDKNI PIRIGVNAGS LEKDLQEKYG EPTPQALLES AMRHVDHLDR LNFDQFKVSV
KASDVFLAVE SYRLLAKQID QPLHLGITEA GGARSGAVKS AIGLGLLLSE GIGDTLRVSL
AADPVEEIKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDIITPMDV
SIIGCVVNGP GEALVSTLGV TGGNKKSGLY EDGVRKDRLD NDDMIAQLES RIRAKASQLD
EARRIDVLQV EK
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