Gene SeD_A2881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_A2881 
Symbol 
ID6871783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011205 
Strand
Start bp2769554 
End bp2771245 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content56% 
IMG OID642785928 
Producthypothetical protein 
Protein accessionYP_002216578 
Protein GI198245369 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACG CTATTCAGGC GGTAAAGGCG AAAAACAGCG AGTCGATCCC GCTACTCATC 
ACCACTACCG ATGCGATGGG CAACCCGGTG CCTTATGCGA CTTTTTCGCT TAAACGCGAC
GCCGGGAAGG CGCGCAACAC CGACTATAAT AAATTTGTAG CCACTAACGG CACCAACATG
ACGGTGACGC CGCTCACCGG TGCGCAGCAA CAGTTTTACT ATGCCACATC GGTTCTGACC
GGCGCCACCG GCGCGGATGG TACGCTGGCC CTGACGCTTG CCGAACCCGG CGGCATAGGG
TTGAAAAACC AGCTGACCGC GAATCTGAAC GATACGCCGA CGGCGACCTC ATCGCTGCCG
GTGGTGTTCA CCGTCCTCAC CAGCCCGGAC AGCGACAAGG CCAACATGTA CGGCCATATG
CCGGAGACCT TCACCGCCAG CAACGGTGCG GAGTTTAAGC GCCCGCTGGT GGCAGGCGAG
CCCTCATCGG AGGCGCACAC GGATACCTAT TTCGAAACCA ATGAAAACTG GATCATGGTG
AATAGTTTTA ATACCGGCAA TTACGGCGGG TGTCCGATGA ACCAGATGGC TGCGATAGAT
GATTTCACTG CGCTGTACAA CGATCACCCA AGCGGCAAGG TGGCGACCGA TATTGGATTG
CCCGTCGGGA AGCGGTGGTG GGCGGGGGAT AGCCTGCTGG AAGGCTCAAC CCTTTACTGG
CAGTATAAAG ATCTCAAGAC GGGGAAAAAC TACAGCATGT CGGAAAACCC GGGTAACTAC
TACTTACAAC TCTGCCTGAC AACATCGCGC AGCGGGCTGA ATATCGCGCT CTCTTCCGAC
GCATGGAACG CCGATAAATC AGCGGCTGTG GCGAAAAAAG GCGAAACGAT ACCGATGACG
GTAACGGTGA CTAACGACGC CGGGCAGCCG CAGGCCGGGG TGGCCGTACT GTTGACGCGT
GAATACTCTT ATTCGCGCGG TGCGGTGGAT AAGCAATACA TTGAACCAGG CGTGATTGGC
GAGCCGGTTC CGTTTACAAC TTCGCCGGCG AATATGATGC TGACGCCGGT TGCACCTGCG
GGTACGGCAG TGGCGTTTAA TAACCAGAAT GGCCTCAGCA CAAAATGGTC TGGCTTCACC
GGCGATGACG GTAAGTTGCG GTTTACGTTA ACTCAGGATA AATCGCTGGG GTTAAAAACG
TCTGTCACGG CGGCGCTTGC GAATCAATTT GATGAGGCGG CGAGCGTGGA TGCAATCTTT
ACGGTACAAA CCAGCCCGGA CACGCCGTAT GCGTCATACT GGGGTCATAT GCCGGATACC
GTGCAGGTGA ACGGCGTTAC GCTGCGCCGC CCGTACCTGA AAGCCGAGCT CTCTGCCGCG
CCCCGGGATA CCTGGCCGTT TAATAATGAA TTCTGGGGGA CGAACTATTA TTATCAGTCC
GAACACGTGG AAACATCGCT GACACATCTT TGCGGATCGC AGGAAAATAT AGCCTCGTTG
GACGATCTGA AAGCGTTGCA GAGCGTTATC GGCACGTTGC AATGGCCGAC GACATCATCC
TGGGACTATG TGTCGCAAGA TGAAGGTCAA AGCAATAAGT ACTACTGTTC ATTTAACGAA
ACGACCGGCC AGACAACCTG TACTCGTGAA AAAGCGACGA CCTCGGGCTT AGGCTCGTGC
CGGGTGCCGT AG
 
Protein sequence
MDDAIQAVKA KNSESIPLLI TTTDAMGNPV PYATFSLKRD AGKARNTDYN KFVATNGTNM 
TVTPLTGAQQ QFYYATSVLT GATGADGTLA LTLAEPGGIG LKNQLTANLN DTPTATSSLP
VVFTVLTSPD SDKANMYGHM PETFTASNGA EFKRPLVAGE PSSEAHTDTY FETNENWIMV
NSFNTGNYGG CPMNQMAAID DFTALYNDHP SGKVATDIGL PVGKRWWAGD SLLEGSTLYW
QYKDLKTGKN YSMSENPGNY YLQLCLTTSR SGLNIALSSD AWNADKSAAV AKKGETIPMT
VTVTNDAGQP QAGVAVLLTR EYSYSRGAVD KQYIEPGVIG EPVPFTTSPA NMMLTPVAPA
GTAVAFNNQN GLSTKWSGFT GDDGKLRFTL TQDKSLGLKT SVTAALANQF DEAASVDAIF
TVQTSPDTPY ASYWGHMPDT VQVNGVTLRR PYLKAELSAA PRDTWPFNNE FWGTNYYYQS
EHVETSLTHL CGSQENIASL DDLKALQSVI GTLQWPTTSS WDYVSQDEGQ SNKYYCSFNE
TTGQTTCTRE KATTSGLGSC RVP