Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeD_A2866 |
Symbol | upp |
ID | 6875540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
Kingdom | Bacteria |
Replicon accession | NC_011205 |
Strand | - |
Start bp | 2740970 |
End bp | 2741596 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642785917 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_002216567 |
Protein GI | 198242862 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.711785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG TGGAAGTCAA ACACCCACTC GTCAAACACA AGCTGGGTCT GATGCGTGAA AACGACATTA GCACTAAACG CTTTCGTGAA CTCGCCTCAG AAGTAGGCAG CCTGCTGACG TATGAAGCGA CAGCCGACCT GGAAACGGAA AAAGTCACCA TCGAAGGCTG GAATGGCCCG GTGGAAATCG ACCAGATCAA AGGTAAAAAA ATTACCGTTG TGCCGATTCT GCGCGCGGGT CTGGGCATGA TGGAAGGCGT TCTGGAAAAT GTACCGAGCG CGCGTATCAG CGTAGTCGGG ATGTACCGTA ACGAAGAGAC GCTTGAGCCA GTACCTTATT TCCAGAAACT GGTATCGAAC ATTGATGAGC GCATGGCGCT GATCGTCGAC CCGATGCTGG CGACCGGCGG TTCTGTCATC GCGACCATCG ACCTGCTGAA AAAAGCAGGC TGTAGCAGCA TTAAGGTGCT GGTGCTGGTC GCCGCGCCGG AAGGCATTGC GGCGCTGGAA AAAGCGCACC CGGACGTTGA ACTGTACACC GCCTCTATCG ATCAGGGGCT TAACGAGCAC GGATACATTA TTCCGGGGCT TGGCGATGCC GGCGATAAGA TTTTTGGTAC CAAATAA
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Protein sequence | MKIVEVKHPL VKHKLGLMRE NDISTKRFRE LASEVGSLLT YEATADLETE KVTIEGWNGP VEIDQIKGKK ITVVPILRAG LGMMEGVLEN VPSARISVVG MYRNEETLEP VPYFQKLVSN IDERMALIVD PMLATGGSVI ATIDLLKKAG CSSIKVLVLV AAPEGIAALE KAHPDVELYT ASIDQGLNEH GYIIPGLGDA GDKIFGTK
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